Co-expression analysis

Gene ID Zm.4862.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g23920: unknown protein (HF=2e+0)
Module size 33 genes
NF 0.38
%ile 41.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.81Zm.4862.2.S1_atAI666004--2e+0At2g23920unknown proteinO.I.H.G.S.X.
0.6381.10.90Zm.13870.2.A1_atAF099435.1R2R3MYB-domain protein-2e-5At5g40330MYB23 (MYB DOMAIN PROTEIN 23)O.I.H.G.S.X.
0.5875.10.89Zm.16345.1.S1_atCF602410hypothetical protein LOC100278582-5e+0At5g39140unknown proteinO.I.H.G.S.X.
0.5469.80.87Zm.1914.1.S1_atBM334513hypothetical protein LOC100277080-2e-1At4g19645-O.I.H.G.S.X.
0.5369.10.88Zm.5851.1.A1_atBM337140hypothetical protein LOC100272940-1e-2At4g38630RPN10 (REGULATORY PARTICLE NON-ATPASE 10)O.I.H.G.S.X.
0.5166.40.91Zm.3664.1.S1_atCF630053hypothetical protein LOC100192489-1e-15At5g45430protein kinase, putativeO.I.H.G.S.X.
0.5166.40.91Zm.12357.1.A1_atCB381715hypothetical protein LOC100272551-3e-5At5g02030RPL (REPLUMLESS)O.I.H.G.S.X.
0.4961.90.91Zm.4433.1.S1_atAY108076.1G-patch domain containing protein-4e-2At3g09850D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.4759.90.88Zm.1724.1.S1_atBE512255hypothetical protein LOC100191314-2e-12At3g0963060S ribosomal protein L4/L1 (RPL4A)O.I.H.G.S.X.
0.4352.80.91Zm.5777.1.A1_atAI649584hypothetical protein LOC100273681-7e+0At4g30660hydrophobic protein, putative / low temperature and salt responsive protein, putativeO.I.H.G.S.X.
0.3945.60.90Zm.9031.1.S1_atCD441372chloroplast Cu-Zn superoxide dismutase-8e-37At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)O.I.H.G.S.X.
0.3945.60.87Zm.7429.1.A1_atCF635433hypothetical protein LOC100279582-2e-1At4g32285epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.3844.20.87Zm.9982.1.A1_atBM348523spotted leaf protein 11-6e+0At5g48870SAD1 (SUPERSENSITIVE TO ABA AND DROUGHT 1)O.I.H.G.S.X.
0.3844.20.85Zm.4191.2.S1_a_atBQ547780hypothetical protein LOC100280227-1e-7At3g13340WD-40 repeat family proteinO.I.H.G.S.X.
0.3844.20.90Zm.11637.1.A1_atBM379485--5e-7At5g47910RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)O.I.H.G.S.X.
0.3844.20.86Zm.8307.2.A1_x_atCF635305--4e-1At5g08150unknown proteinO.I.H.G.S.X.
0.3742.30.88ZmAffx.615.1.S1_atAI715043--3e+0At5g42790PAF1O.I.H.G.S.X.
0.3742.30.90Zm.2321.3.A1_a_atBG841291hypothetical protein LOC100191581 /// hypothetical protein LOC100274569-3e-9At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)O.I.H.G.S.X.
0.3641.30.93Zm.8946.1.A1_atBM339897Guanylyl cyclase-like protein-7e-4At5g05930guanylyl cyclase-related (GC1)O.I.H.G.S.X.
0.3641.30.88Zm.13587.1.S1_atAY107817.1--7e-7At3g26790FUS3 (FUSCA 3)O.I.H.G.S.X.
0.3437.20.91ZmAffx.401.1.S1_atAI676829--2e-1At5g46030unknown proteinO.I.H.G.S.X.
0.3437.20.87ZmAffx.635.1.S1_atAI715063--1e+1At2g25570bindingO.I.H.G.S.X.
0.3336.00.90Zm.301.1.A1_a_atBM334689subtilisin-chymotrypsin inhibitor CI-1B /// subtilisin-chymotrypsin inhibitor homolog1-2e+1Atcg01270-O.I.H.G.S.X.
0.3233.40.90Zm.19020.1.A1_atCO521687hypothetical protein LOC100279277-2e+0At2g04495unknown proteinO.I.H.G.S.X.
0.3029.80.89Zm.18044.1.A1_atAF519538.1RNA polymerase II largest subunit-2e-123At4g35800NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)O.I.H.G.S.X.
0.2928.10.89Zm.5776.1.A1_atCO520963hypothetical protein LOC100273913-9e-2At2g47140short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2828.10.90Zm.6732.1.S1_s_atAF440221.1HMG-like nucleosome/chromatin assembly factor D-3e-11At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)O.I.H.G.S.X.
0.2828.10.89Zm.13305.1.A1_atCA827336VQ motif family protein-1e+1At5g64720unknown proteinO.I.H.G.S.X.
0.2828.10.91Zm.6079.2.S1_atCO53363560S ribosomal protein L23a-2e-62At2g39460RPL23AA (RIBOSOMAL PROTEIN L23AA)O.I.H.G.S.X.
0.2828.10.93Zm.7519.1.A1_atBM337506--1e+0At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.H.G.S.X.
0.2521.30.89Zm.5872.1.A1_atCF037565--8e-14At1g73720transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2419.80.94Zm.4027.2.A1_atCO527250hypothetical protein LOC100272558-6e-1At1g49600ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a)O.I.H.G.S.X.
0.1811.60.91Zm.11954.1.A1_atBM382100hypothetical protein LOC100216665-1e+0At4g19590DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.298.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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