Co-expression analysis

Gene ID	Zm.484.1.A1_at
Gene name	elongation factor 1 alpha
Homology with Arabidopsis	Similar to At1g07920: elongation factor 1-alpha / EF-1-alpha (HF=0)
Module size	10 genes
NF	0.44
%ile	52.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.8	0.97	Zm.484.1.A1_at	AF136827.1	elongation factor 1 alpha	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.52	67.3	0.96	Zm.3715.1.A1_at	AY107107.1	-	-	9e-56	At5g11200	DEAD/DEAH box helicase, putative	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.3080.1.A1_at	BM382308	IAA13 - auxin-responsive Aux/IAA family member	-	3e-15	At3g23050	IAA7 (INDOLE-3-ACETIC ACID 7)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.3773.1.A1_at	AY110209.1	Hypothetical protein LOC100193094	-	4e+0	At4g18620	-	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.97	Zm.4201.1.A1_at	BM381822	hypothetical protein LOC100274325	-	2e+0	At3g21215	RNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.17197.1.A1_at	CO531814	DNA binding protein	-	3e-3	At3g51960	bZIP family transcription factor	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.1989.1.S1_at	AW566298	hypothetical protein LOC100193882	-	3e-14	At2g41970	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.97	Zm.2236.1.S1_at	BQ538247	peroxiredoxin bcp	-	9e-9	At3g26060	ATPRX Q	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.97	Zm.14347.1.S1_at	AY106522.1	-	-	2e+0	At3g29590	AT5MAT	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.6941.1.A1_at	CF638044	-	-	4e-1	At3g46770	transcriptional factor B3 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.4	99.2	GSM320468	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320472	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320465	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.4	98.3	GSM320473	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320471	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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