Co-expression analysis

Gene ID Zm.4774.1.A1_at
Gene name hypothetical protein LOC100191958
Homology with ArabidopsisSimilar to At3g26360: unknown protein (HF=1e+0)
Module size 9 genes
NF 0.50
%ile 64.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.98Zm.4774.1.A1_atCF637265hypothetical protein LOC100191958-1e+0At3g26360unknown proteinO.I.H.G.S.X.
0.6179.50.98Zm.11611.1.A1_atBM379298hypothetical protein LOC100192942-5e+0At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)O.I.H.G.S.X.
0.5976.10.98Zm.18084.1.A1_atCD997940--8e-7At1g16870mitochondrial 28S ribosomal protein S29-relatedO.I.H.G.S.X.
0.5775.10.99Zm.11338.1.A1_atBM349130hypothetical protein LOC100274516-3e-6At2g40190glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.4759.90.99ZmAffx.732.1.A1_atAI740043--5e+0At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)O.I.H.G.S.X.
0.4352.80.99ZmAffx.531.1.A1_atAI711719--8e-1At5g20370serine-rich protein-relatedO.I.H.G.S.X.
0.4251.30.98Zm.4196.1.A1_s_atAI739903hypothetical protein LOC100193143-1e+0At1g22790unknown proteinO.I.H.G.S.X.
0.3844.20.99Zm.5070.1.A1_atAY108736.1hypothetical protein LOC100193023-2e-16At1g22950iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsO.I.H.G.S.X.
0.2318.60.99Zm.5230.1.A1_atCA404914acyl-desaturase-2e-17At2g43710SSI2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.898.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage