Co-expression analysis

Gene ID Zm.4705.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g14980: CPN10 (CHAPERONIN 10) (HF=2e-6)
Module size 7 genes
NF 0.26
%ile 22.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4658.40.94Zm.4705.1.A1_atBG840802--2e-6At1g14980CPN10 (CHAPERONIN 10)O.I.H.G.S.X.
0.4048.50.96Zm.5502.1.A1_atBM378399hypothetical protein LOC100274214-1e-2At1g14330kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3336.00.96Zm.10125.1.A1_a_atCF628795cytidine/deoxycytidylate deaminase family protein-5e-1At5g29807unknown proteinO.I.H.G.S.X.
0.2115.50.96Zm.11984.1.A1_atAY107185.1PB1 domain containing protein-5e+0At5g25830zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.1912.80.96Zm.12899.1.A1_atCO531244--9e-1At3g11750dihydroneopterin aldolase, putativeO.I.H.G.S.X.
0.1912.80.97Zm.11708.1.A1_atBM380110hypothetical protein LOC100279180-5e+0At3g61530PANB2O.I.H.G.S.X.
0.158.60.97ZmAffx.934.1.A1_atAI795526--2e-1At2g45990unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.598.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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