Co-expression analysis

Gene ID Zm.4686.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g51090: heavy-metal-associated domain-containing protein (HF=3e-1)
Module size 34 genes
NF 0.25
%ile 20.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.30.93Zm.4686.1.S1_atBE510475--3e-1At1g51090heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.4251.30.96Zm.11650.1.A1_atBM379683hypothetical protein LOC100192105-4e+0At2g12405unknown proteinO.I.H.G.S.X.
0.4048.50.96Zm.10735.1.S1_atCD444508hypothetical protein LOC100192974-1e+0At5g63530ATFP3O.I.H.G.S.X.
0.4048.50.96Zm.4338.1.A1_atCF638243peroxidase 72-1e-8At5g66390peroxidase 72 (PER72) (P72) (PRXR8)O.I.H.G.S.X.
0.3742.30.96Zm.13712.1.S1_atAY106534.1--4e+0At2g46640unknown proteinO.I.H.G.S.X.
0.3437.20.96Zm.2234.3.A1_a_atCO526105hypothetical protein LOC100273895-9e-9At4g17180glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.3437.20.94Zm.14701.1.A1_atCB334376--1e-25At3g03940protein kinase family proteinO.I.H.G.S.X.
0.3233.40.96Zm.13217.1.A1_atAI065901hypothetical protein LOC100273064-1e+0At1g31500endonuclease/exonuclease/phosphatase family proteinO.I.H.G.S.X.
0.3029.80.96Zm.18460.1.S1_atCO521354hypothetical protein LOC100216873-8e-3At1g60430ARPC3 (actin-related protein C3)O.I.H.G.S.X.
0.3029.80.97Zm.13055.1.S1_atCF637576--2e-14At4g14540NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)O.I.H.G.S.X.
0.2928.10.97Zm.5851.8.S1_a_atX85334.1ZEM3-1e-7At4g18960AG (AGAMOUS)O.I.H.G.S.X.
0.2928.10.96Zm.9562.1.S1_atD88452.1aldehyde oxidase-2-4e-5At5g20960AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1)O.I.H.G.S.X.
0.2724.60.97Zm.1940.1.S1_atAW507032--5e-1At4g13615four F5 protein-related / 4F5 protein-relatedO.I.H.G.S.X.
0.2724.60.97Zm.17532.1.A1_atCK369868hypothetical protein LOC100279205-2e-1At5g53970aminotransferase, putativeO.I.H.G.S.X.
0.2724.60.97Zm.3153.2.S1_s_atAY103722.1ferredoxin1 /// ferredoxin5-2e+0At3g22820allergen-relatedO.I.H.G.S.X.
0.2724.60.97Zm.1574.1.S1_atAY106519.1--6e-20At2g24320unknown proteinO.I.H.G.S.X.
0.2622.70.94Zm.4664.3.A1_a_atAY108266.1fatty acid elongase-4e+0At5g65070MAF4 (MADS AFFECTING FLOWERING 4)O.I.H.G.S.X.
0.2622.70.95Zm.12423.1.S1_atAY105422.1reticuline oxidase-7e+0At4g30430TET9 (TETRASPANIN9)O.I.H.G.S.X.
0.2622.70.97Zm.2150.1.A1_a_atCD977294Hypothetical protein LOC100193916-4e-33At5g20920EIF2 BETAO.I.H.G.S.X.
0.2521.30.97Zm.18885.1.A1_atCO530040hypothetical protein LOC100276818-3e+0At5g28780unknown proteinO.I.H.G.S.X.
0.2521.30.97Zm.11992.1.A1_atBM382475--3e+0At5g41614unknown proteinO.I.H.G.S.X.
0.2419.80.97Zm.11761.1.A1_atBM380541--1e+1At4g10170synaptobrevin-related family proteinO.I.H.G.S.X.
0.2419.80.97Zm.791.1.S1_s_atAY111675.1hypothetical protein LOC100280140-3e+0At4g1672060S ribosomal protein L15 (RPL15A)O.I.H.G.S.X.
0.2419.80.95Zm.4602.1.A1_atAI737296--1e-1At3g01280VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)O.I.H.G.S.X.
0.2318.60.96Zm.11649.1.A1_atBM379675--1e+0At2g35550BPC7 (BASIC PENTACYSTEINE 7)O.I.H.G.S.X.
0.2216.90.97Zm.18385.1.S1_atCO530624hypothetical protein LOC100276763-1e-1At3g47810MAG1 (MAIGO 1)O.I.H.G.S.X.
0.1710.60.96Zm.17436.1.A1_atCK347538--4e-1At2g18970unknown proteinO.I.H.G.S.X.
0.169.40.98Zm.14476.2.A1_atAY109949.1Protein disulfide isomerase-1e-5At3g54960ATPDIL1-3 (PDI-LIKE 1-3)O.I.H.G.S.X.
0.169.40.98Zm.13679.1.A1_atAW424469chemocyanin-9e-5At1g72230plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.158.60.97ZmAffx.1067.1.S1_atAI901309--1e+0At4g05220harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.H.G.S.X.
0.147.70.97Zm.19175.1.A1_atCF012464hypothetical protein LOC100272883-2e+0At1g69780ATHB13O.I.H.G.S.X.
0.136.80.96Zm.15437.1.S1_atCD219447hypothetical protein LOC100191830-6e+0At5g3767015.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)O.I.H.G.S.X.
0.125.90.96Zm.18260.1.A1_atCF602623ER lumen protein retaining receptor C28H8.4-3e-6At2g21190ER lumen protein retaining receptor family proteinO.I.H.G.S.X.
0.094.00.96Zm.2548.1.A1_atAY106256.1--2e-26At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.099.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
24.099.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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