Co-expression analysis

Gene ID	Zm.4642.1.A1_at
Gene name	hypothetical protein LOC100272780
Homology with Arabidopsis	Similar to At5g04080: unknown protein (HF=1e+0)
Module size	11 genes
NF	0.47
%ile	59.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	87.0	0.96	Zm.4642.1.A1_at	AI737769	hypothetical protein LOC100272780	-	1e+0	At5g04080	unknown protein	O.I.	H.G.	S.X.	Please select
0.70	87.0	0.97	Zm.13250.1.A1_at	AJ005338.1	Zea mays MADS14	-	3e-2	At2g03710	SEP4 (SEPALLATA 4)	O.I.	H.G.	S.X.	Please select
0.64	81.7	0.95	Zm.2773.1.A1_at	AW067196	-	-	3e+0	At3g56610	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.97	Zm.8492.1.A1_at	CO518733	cyclin-dependent kinases regulatory subunit	-	4e-7	At2g27960	CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.97	Zm.18445.1.S1_at	CO519931	peptide methionine sulfoxide reductase msrB	-	9e-12	At1g53670	MSRB1 (methionine sulfoxide reductase B 1)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.9757.1.A1_at	BM338070	-	-	5e-3	At1g73150	GTE3 (GLOBAL TRANSCRIPTION FACTOR GROUP E 3)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.12052.1.A1_at	AI891193	-	-	1e-1	At2g26140	ftsh4 (FtsH protease 4)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.12901.1.S1_at	CA401285	BADH-like protein	-	4e-12	At3g66658	ALDH22a1 (Aldehyde Dehydrogenase 22a1)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.98	Zm.3621.1.A1_at	AW438135	genetic modifier	-	1e-10	At4g11570	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.3116.1.S1_at	CO534304	-	-	2e-17	At5g47540	binding	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.97	Zm.545.1.S1_at	AF244680.1	glutathione S-transferase GST 15	-	2e+0	At3g59370	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.8	98.3	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
9.2	98.2	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
8.7	98.1	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
8.0	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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