Co-expression analysis

Gene ID Zm.4595.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g30190: unknown protein (HF=4e-1)
Module size 6 genes
NF 0.71
%ile 92.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.97Zm.4595.1.A1_atAI737265--4e-1At1g30190unknown proteinO.I.H.G.S.X.
0.9199.00.97Zm.4592.1.A1_atBM348651hypothetical protein LOC100275868-8e+0At5g39690ANAC093 (Arabidopsis NAC domain containing protein 93)O.I.H.G.S.X.
0.8395.60.97Zm.18325.1.S1_atCO530408lipid binding protein-2e+0At5g02560HTA12O.I.H.G.S.X.
0.6785.80.98Zm.14536.1.A1_atAY187719.1SET domain protein SDG117-5e-1At1g55260lipid bindingO.I.H.G.S.X.
0.5571.60.97Zm.4596.1.A1_atCF636987lipoxygenase-4e-1At5g17670hydrolase, acting on ester bondsO.I.H.G.S.X.
0.4455.70.97Zm.17280.1.S1_atCK369569--7e-2At1g03900ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.298.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.51905.1.S1_at, orthologous to the query gene, Zm.4595.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6383.1TaAffx.51905.1.S1_atAt1g30190--3e+0At3g25760AOC1 (ALLENE OXIDE CYCLASE 1)O.I.H.G.S.X.
0.6886.5Ta.3911.2.S1_s_atAt1g30190--4e+0At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)O.I.H.G.S.X.
0.6886.5TaAffx.85941.1.S1_atAt1g30190--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6383.1TaAffx.110167.1.S1_atAt1g30190--4e+0At4g14440HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)O.I.H.G.S.X.
0.6282.3TaAffx.85817.1.S1_atAt1g30190--4e+0At4g17800DNA-binding protein-relatedO.I.H.G.S.X.
0.6182.0TaAffx.119081.1.S1_atAt1g30190--2e+1At5g45700NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.5779.2TaAffx.6157.1.S1_atAt1g30190--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.5576.8TaAffx.132656.2.S1_atAt1g30190--1e+0At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.5475.5TaAffx.51594.1.S1_atAt1g30190--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.H.G.S.X.
0.5475.5TaAffx.109175.2.S1_x_atAt1g30190--1e+0At4g29020glycine-rich proteinO.I.H.G.S.X.
0.5374.9Ta.21581.1.S1_atAt1g30190--4e+0At2g36460fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.5072.4TaAffx.5596.1.S1_atAt1g30190--3e+0At1g12250thylakoid lumenal protein-relatedO.I.H.G.S.X.
0.4869.0TaAffx.3664.1.S1_atAt1g30190--2e+0At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.4767.9TaAffx.110652.1.S1_atAt1g30190--1e-2At2g23690unknown proteinO.I.H.G.S.X.
0.4666.8TaAffx.73323.1.S1_atAt1g30190--3e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.4565.2TaAffx.79437.1.S1_atAt1g30190--3e+0At1g02680TAF13 (TBP-ASSOCIATED FACTOR 13)O.I.H.G.S.X.
0.4464.5TaAffx.118620.1.S1_atAt1g30190--1e+0At2g31560unknown proteinO.I.H.G.S.X.
0.3956.1Ta.30411.1.S1_atAt1g30190--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.3854.7Ta.6759.2.S1_atAt1g30190--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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