| Gene ID | Zm.4595.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g30190: unknown protein (HF=4e-1) |
| Module size | 6 genes |
| NF | 0.71 |
| %ile | 92.4 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.60 | 77.8 | 0.97 | Zm.4595.1.A1_at | AI737265 | - | - | 4e-1 | At1g30190 | unknown protein | O.I. | H.G. | S.X. | |
| 0.91 | 99.0 | 0.97 | Zm.4592.1.A1_at | BM348651 | hypothetical protein LOC100275868 | - | 8e+0 | At5g39690 | ANAC093 (Arabidopsis NAC domain containing protein 93) | O.I. | H.G. | S.X. | |
| 0.83 | 95.6 | 0.97 | Zm.18325.1.S1_at | CO530408 | lipid binding protein | - | 2e+0 | At5g02560 | HTA12 | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.98 | Zm.14536.1.A1_at | AY187719.1 | SET domain protein SDG117 | - | 5e-1 | At1g55260 | lipid binding | O.I. | H.G. | S.X. | |
| 0.55 | 71.6 | 0.97 | Zm.4596.1.A1_at | CF636987 | lipoxygenase | - | 4e-1 | At5g17670 | hydrolase, acting on ester bonds | O.I. | H.G. | S.X. | |
| 0.44 | 55.7 | 0.97 | Zm.17280.1.S1_at | CK369569 | - | - | 7e-2 | At1g03900 | ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 12.2 | 98.6 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.3 | 98.5 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.7 | 98.5 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.2 | 98.2 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.6 | 98.1 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.5 | 98.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.0 | 98.0 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.8 | 97.9 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.7 | 97.9 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.5 | 95.1 | GSM320468 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 87.2 | Os11g0148700 | At1g30190 | - | Zn-finger-like, PHD finger domain containingprotein | 7e+0 | At5g35210 | peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein | O.I. | H.G. | S.X. | |
| 0.71 | 89.6 | Os10g0559600 | At1g30190 | - | Agenet domain containing protein | 2e-4 | At4g17330 | ATG2484-1 | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os11g0303500 | At1g30190 | - | Hypothetical protein | 3e-1 | At5g01900 | WRKY62 | O.I. | H.G. | S.X. | |
| 0.59 | 78.0 | Os07g0497000 | At1g30190 | - | Chromodomain helicase-DNA-binding protein Mi-2homolog (dMi-2) | 2e-48 | At5g44800 | CHR4 (CHROMATIN REMODELING 4) | O.I. | H.G. | S.X. | |
| 0.53 | 71.3 | Os03g0213300 | At1g30190 | - | Hypothetical protein | 7e-1 | At1g47495 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os05g0562400 | At1g30190 | - | DDT domain containing protein | 2e-7 | At1g28420 | HB-1 (homeobox-1) | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | Os03g0672700 | At1g30190 | - | Hypothetical protein | 2e+0 | At4g39955 | hydrolase, alpha/beta fold family protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os12g0102400 | At1g30190 | - | RNA-binding region RNP-1 (RNA recognition motif)domain containing protein | 6e-16 | At3g45630 | RNA recognition motif (RRM)-containing protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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