Co-expression analysis

Gene ID Zm.4542.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g44783: unknown protein (HF=1e+0)
Module size 8 genes
NF 0.37
%ile 39.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.96Zm.4542.1.A1_atAI734680--1e+0At3g44783unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.245.1.S1_atAY108063.1glutathione transferase6-2e-1At1g27130ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)O.I.H.G.S.X.
0.3336.00.97Zm.14995.1.A1_atBQ538186--2e+0At1g62960ACS10 (ACC SYNTHASE 10)O.I.H.G.S.X.
0.3336.00.97Zm.13744.1.S1_atAY106035.1guanine nucleotide-binding protein alpha-1 subunit-2e-14At2g26300GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1)O.I.H.G.S.X.
0.3131.60.97Zm.6345.1.A1_atAI691483hypothetical protein AY108778-6e-1At2g32710KRP4O.I.H.G.S.X.
0.2928.10.97Zm.13021.1.A1_atCK787287--4e-1At4g15885kinesin motor protein-relatedO.I.H.G.S.X.
0.2521.30.97Zm.19241.1.A1_atCO517742WW domain-containing oxidoreductase-6e+0At4g22160unknown proteinO.I.H.G.S.X.
0.2318.60.97Zm.2321.4.A1_atCD978285alanine aminotransferase 2-6e-19At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.398.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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