Co-expression analysis

Gene ID	Zm.4471.5.A1_at
Gene name	protein kinase APK1B
Homology with Arabidopsis	Similar to At3g47510: unknown protein (HF=2e-2)
Module size	6 genes
NF	0.27
%ile	23.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	58.4	0.98	Zm.4471.5.A1_at	BF729171	protein kinase APK1B	-	2e-2	At3g47510	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.6929.1.A1_a_at	BG842822	CDPK substrate protein 1	-	3e-5	At5g29000	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.98	Zm.14120.1.S1_at	AY105834.1	-	-	7e-30	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.98	Zm.4774.1.A1_at	CF637265	hypothetical protein LOC100191958	-	1e+0	At3g26360	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.98	ZmAffx.1149.1.A1_at	AW424528	-	-	3e+0	At3g07930	HhH-GPD base excision DNA repair family protein	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.98	Zm.1360.1.S1_x_at	AW927383	hypothetical protein LOC100276510	-	6e-1	At4g27890	nuclear movement family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.6	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.7	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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