Co-expression analysis

Gene ID Zm.442.1.S1_at
Gene name unconventional myosin heavy chain
Homology with ArabidopsisSimilar to At5g20490: XIK (HF=5e-48)
Module size 6 genes
NF 0.51
%ile 66.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.442.1.S1_atAF104924.2unconventional myosin heavy chain-5e-48At5g20490XIKO.I.H.G.S.X.
0.5976.10.97ZmAffx.827.1.A1_atAI770520Growth-regulating factor 8-like-3e+0At3g21610-O.I.H.G.S.X.
0.5065.70.98Zm.14473.2.A1_atCK347999hypothetical protein LOC100191612-8e-3At1g7406060S ribosomal protein L6 (RPL6B)O.I.H.G.S.X.
0.3641.30.98Zm.1042.1.A1_atAY105661.1--3e-1At2g25340ATVAMP712 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 712)O.I.H.G.S.X.
0.3131.60.98Zm.3780.1.S1_atAW438304low-molecular-weight cysteine-rich protein LCR69-9e-2At1g47317-O.I.H.G.S.X.
0.3029.80.98Zm.2806.1.A1_atAW067337--6e-1At2g41660MIZ1 (mizu-kussei 1)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6785.80.97Zm.3434.1.A1_atAY105790.1Hypothetical protein LOC100194272-7e-1At4g08260protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.6077.80.98Zm.5031.1.A1_atAI600468--2e-2At5g62160AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)O.I.H.G.S.X.
0.5065.70.98Zm.10284.1.S1_atBM736317--2e+1At5g38300unknown proteinO.I.H.G.S.X.
0.4455.70.96Zm.4786.1.A1_atCF633671--2e-1At3g25150nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4352.80.97Zm.13601.1.S1_atAY107674.1--6e+0At5g44740POLH (Y-FAMILT DNA POLYMERASE H)O.I.H.G.S.X.
0.4251.30.97Zm.11530.1.A1_atAY105387.1Hypothetical protein LOC100216571-1e-1At3g52550-O.I.H.G.S.X.
0.4048.50.96Zm.13494.1.S1_atAY108782.1--4e-1At2g17300unknown proteinO.I.H.G.S.X.
0.4048.50.96Zm.6369.3.S1_a_atAI881634putative zinc finger protein30-5e-5At3g15680zinc finger (Ran-binding) family proteinO.I.H.G.S.X.
0.4048.50.97Zm.9580.2.S1_atAI734597--2e+0At2g31305INH3 (INHIBITOR-3)O.I.H.G.S.X.
0.4048.50.97Zm.3633.1.A1_atU33816.1beta glucosidase1-1e-6At5g36890BGLU42 (BETA GLUCOSIDASE 42)O.I.H.G.S.X.
0.3844.20.96Zm.17724.3.S1_x_atCK370253--2e-1At1g04985unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.2092.1.A1_atBM072795dnaJ protein-1e+0At5g01390DNAJ heat shock protein, putativeO.I.H.G.S.X.
0.3538.90.97Zm.15820.1.S1_atAY270041.1Na+/H+ antiporter NHX6-9e-7At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)O.I.H.G.S.X.
0.3336.00.97Zm.2384.1.A1_atAY104473.1--2e+0At1g02405proline-rich family proteinO.I.H.G.S.X.
0.3336.00.97Zm.8010.1.A1_atBM073897--9e+0At5g65870ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)O.I.H.G.S.X.
0.3336.00.97Zm.4247.1.A1_atCF033638--5e+0At5g07310AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.3233.40.96Zm.16829.3.A1_atAY111089.1--4e+0At5g55240caleosin-related family protein / embryo-specific protein, putativeO.I.H.G.S.X.
0.3233.40.95Zm.11642.1.A1_atCO532952protein kinase-3e-1At5g23680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.3131.60.95Zm.16790.1.S1_atAY110991.1--1e-2At2g43150proline-rich extensin-like family proteinO.I.H.G.S.X.
0.3131.60.97Zm.8720.2.A1_a_atBM267300UDP-glucose-4-epimerase-5e+0At5g16486-O.I.H.G.S.X.
0.3131.60.97Zm.12940.2.S1_atAI770813--8e-1At4g15050unknown proteinO.I.H.G.S.X.
0.3029.80.96Zm.1554.1.S1_atAW287806hypothetical protein LOC100276203-1e-14At3g07760-O.I.H.G.S.X.
0.3029.80.97Zm.2384.1.S1_atAY104473.1hypothetical protein LOC100273133-3e-2At3g18380sequence-specific DNA binding / transcription factorO.I.H.G.S.X.
0.2928.10.96Zm.5945.1.S1_a_atAY108142.1hypothetical protein LOC100279077-1e+0At3g63450RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.2928.10.97Zm.3767.2.A1_atBM073671--1e-7At5g20890chaperonin, putativeO.I.H.G.S.X.
0.2724.60.95Zm.1563.1.A1_atCK369965hypothetical protein LOC100275635-2e+0At5g35230unknown proteinO.I.H.G.S.X.
0.2724.60.97Zm.6057.1.S1_atCD437092glycine-rich protein 2b-5e-1At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.2724.60.94Zm.5522.1.A1_atAI622432hypothetical protein LOC100272415-1e+0At5g23950C2 domain-containing proteinO.I.H.G.S.X.
0.2724.60.95Zm.3469.1.A1_atAI967235--2e+0At1g71810ABC1 family proteinO.I.H.G.S.X.
0.2724.60.95Zm.12375.1.S1_atCA827265--3e+0At4g36460unknown proteinO.I.H.G.S.X.
0.2724.60.96Zm.8478.2.A1_x_atBM381399hypothetical protein LOC100275408-1e+0At3g27890NQR (NADPH:QUINONE OXIDOREDUCTASE)O.I.H.G.S.X.
0.2622.70.96Zm.5479.1.S1_atAY109635.1--3e-1At1g71230CSN5B (COP9-SIGNALOSOME 5B)O.I.H.G.S.X.
0.2622.70.97Zm.5987.1.A2_atAF019147.1cysteine protease component of protease-inhibitor complex-7e-14At5g43060cysteine proteinase, putative / thiol protease, putativeO.I.H.G.S.X.
0.2622.70.96Zm.1825.1.S1_atAW574462--3e+0At3g59450calcium-binding EF hand family proteinO.I.H.G.S.X.
0.2622.70.97Zm.10125.2.A1_x_atBM380760cytidine/deoxycytidylate deaminase family protein-4e+0At2g46230-O.I.H.G.S.X.
0.2521.30.95Zm.13531.1.S1_atAY108355.1--4e-1At4g39260GR-RBP8O.I.H.G.S.X.
0.2521.30.95Zm.19309.1.A1_atBM074583solute carrier family 35, member F1-2e+0At3g59320integral membrane protein, putativeO.I.H.G.S.X.
0.2521.30.96Zm.1415.1.A1_atBG840912hypothetical protein LOC100191304-3e-9At5g67400peroxidase 73 (PER73) (P73) (PRXR11)O.I.H.G.S.X.
0.2521.30.97Zm.5435.1.A1_atCO519825mTERF-like protein-1e+0At3g60870DNA-binding protein-relatedO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.297.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM206309Lower pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
6.297.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM206303Upper pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
5.497.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM206308Lower pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
4.996.7GSM206310Lower pulvinus 60 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
4.896.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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