Co-expression analysis

Gene ID	Zm.442.1.S1_at
Gene name	unconventional myosin heavy chain
Homology with Arabidopsis	Similar to At5g20490: XIK (HF=5e-48)
Module size	6 genes
NF	0.51
%ile	66.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.442.1.S1_at	AF104924.2	unconventional myosin heavy chain	-	5e-48	At5g20490	XIK	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.97	ZmAffx.827.1.A1_at	AI770520	Growth-regulating factor 8-like	-	3e+0	At3g21610	-	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.14473.2.A1_at	CK347999	hypothetical protein LOC100191612	-	8e-3	At1g74060	60S ribosomal protein L6 (RPL6B)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.98	Zm.1042.1.A1_at	AY105661.1	-	-	3e-1	At2g25340	ATVAMP712 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 712)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.98	Zm.3780.1.S1_at	AW438304	low-molecular-weight cysteine-rich protein LCR69	-	9e-2	At1g47317	-	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.98	Zm.2806.1.A1_at	AW067337	-	-	6e-1	At2g41660	MIZ1 (mizu-kussei 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.2	97.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.4	97.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.9	96.7	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.8	96.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g20490, orthologous to the query gene, Zm.442.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	O.I.	H.G.	S.X.	Other DB

Select a plant to compare co-expressed genes between species.

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Back to the CoP portal site

Back to the KAGIANA project homepage