Co-expression analysis

Gene ID	Zm.4412.1.S1_at
Gene name	MYB-like protein 1
Homology with Arabidopsis	Similar to At4g22680: MYB85 (myb domain protein 85) (HF=4e-9)
Module size	7 genes
NF	0.09
%ile	5.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.98	Zm.4412.1.S1_at	AI714727	MYB-like protein 1	-	4e-9	At4g22680	MYB85 (myb domain protein 85)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.98	Zm.14272.4.S1_x_at	CK371502	Corn cystatin I	-	1e-1	At5g12140	ATCYS1 (A. thaliana cystatin-1)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.98			-	-				O.I.	H.G.	S.X.	Please select
0.17	10.6	0.98	ZmAffx.808.1.A1_at	AI770390	-	-	8e-4	At2g40070	-	O.I.	H.G.	S.X.	Please select
0.06	2.3	0.98	Zm.16469.1.S1_at	CF650934	-	-	3e-4	At3g15352	ATCOX17	O.I.	H.G.	S.X.	Please select
0.06	2.3	0.98	Zm.16978.1.A1_at	CF646243	hypothetical protein LOC100275636	-	1e+0	At4g10800	-	O.I.	H.G.	S.X.	Please select
0.05	1.9	0.98	ZmAffx.227.1.A1_at	AI670239	-	-	3e+0	At5g50410	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.2	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM202320	B73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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