Co-expression analysis

Gene ID Zm.4373.1.S1_at
Gene name fertilization independent endosperm1
Homology with ArabidopsisSimilar to At3g20740: FIE (FERTILIZATION-INDEPENDENT ENDOSPERM) (HF=2e-5)
Module size 6 genes
NF 0.69
%ile 90.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.95Zm.4373.1.S1_atAY061964.1fertilization independent endosperm1-2e-5At3g20740FIE (FERTILIZATION-INDEPENDENT ENDOSPERM)O.I.H.G.S.X.
0.7188.20.95Zm.14912.1.S1_s_atBQ703314m27 protein /// Zea mays MADS7-1e-2At2g45650AGL6 (AGAMOUS-LIKE 6)O.I.H.G.S.X.
0.6785.80.97Zm.7872.1.S1_atBM350613TBC1 domain family member 22A-2e-9At2g30710RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.6179.50.95Zm.16513.11.A1_a_atAI737282hypothetical protein LOC100217303-3e+0At1g01230ORMDL family proteinO.I.H.G.S.X.
0.4759.90.96Zm.9169.2.S1_x_atCO521754hypothetical protein LOC100194136-9e-10At2g47970NPL4 family proteinO.I.H.G.S.X.
0.4455.70.97Zm.14916.4.S1_a_atBM078301hypothetical protein LOC100193596 /// ubiquitin-conjugating enzyme E2-21 kDa 1-1e-20At2g46030UBC6 (ubiquitin-conjugating enzyme 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.8GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
11.798.6GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM162265Wild type 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
7.997.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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