Co-expression analysis

Gene ID	Zm.435.1.S1_at
Gene name	pyruvate dehydrogenase E1 beta subunit isoform 3
Homology with Arabidopsis	Similar to At5g50850: MAB1 (MACCI-BOU) (HF=3e-28)
Module size	7 genes
NF	0.51
%ile	65.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.95	Zm.435.1.S1_at	AF069910.1	pyruvate dehydrogenase E1 beta subunit isoform 3	-	3e-28	At5g50850	MAB1 (MACCI-BOU)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.95	Zm.10224.2.S1_a_at	CF243959	hypothetical protein LOC100192800	-	1e-5	At3g11397	PRA1.A3 (PRENYLATED RAB ACCEPTOR 1.A3)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.95	Zm.16759.1.A1_at	BM338376	lactoylglutathione lyase	-	1e-11	At1g08110	lactoylglutathione lyase, putative / glyoxalase I, putative	O.I.	H.G.	S.X.	Please select
0.52	67.3	0.95	Zm.1180.1.S1_at	BE512002	PHD finger protein	-	1e-8	At5g26210	AL4 (ALFIN-LIKE 4)	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.97	Zm.6273.1.A1_at	AY108611.1	patellin-5	-	2e-5	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.96	Zm.14438.1.A1_at	CO520860	VAMP-like protein YKT62	-	4e-12	At5g58180	ATYKT62	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.95	Zm.5265.1.S1_at	CD441734	Hypothetical protein LOC100191432	-	4e-1	At5g15200	40S ribosomal protein S9 (RPS9B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.7	98.7	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
11.4	98.5	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
10.0	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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