Co-expression analysis

Gene ID	Zm.4321.1.S1_at
Gene name	hypothetical protein LOC100191344
Homology with Arabidopsis	Similar to At3g51600: LTP5 (Lipid transfer protein 5) (HF=2e-1)
Module size	6 genes
NF	0.62
%ile	83.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.97	Zm.4321.1.S1_at	AI855098	hypothetical protein LOC100191344	-	2e-1	At3g51600	LTP5 (Lipid transfer protein 5)	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.97	Zm.4592.1.A1_at	BM348651	hypothetical protein LOC100275868	-	8e+0	At5g39690	ANAC093 (Arabidopsis NAC domain containing protein 93)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.18325.1.S1_at	CO530408	lipid binding protein	-	2e+0	At5g02560	HTA12	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.14536.1.A1_at	AY187719.1	SET domain protein SDG117	-	5e-1	At1g55260	lipid binding	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.97	Zm.4596.1.A1_at	CF636987	lipoxygenase	-	4e-1	At5g17670	hydrolase, acting on ester bonds	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.97	Zm.17280.1.S1_at	CK369569	-	-	7e-2	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.2	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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