Co-expression analysis

Gene ID Zm.4304.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g18600: DEAD/DEAH box helicase, putative (HF=1e-3)
Module size 6 genes
NF 0.63
%ile 84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.97Zm.4304.1.S1_atAI834719--1e-3At3g18600DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.7389.90.97Zm.13856.1.S1_atAF439727.1formate tetrahyrofolate ligase-9e-58At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)O.I.H.G.S.X.
0.6785.80.97Zm.13853.1.S1_atAF272753.1kinesin heavy chain-1e-14At1g63640kinesin motor protein-relatedO.I.H.G.S.X.
0.5571.60.96Zm.15722.2.A1_atCA404232hypothetical protein LOC100273877-2e+0At3g06110MKP2 (MAPK PHOSPHATASE 2)O.I.H.G.S.X.
0.5065.70.98Zm.17366.1.S1_s_atCK371241--1e+1At5g20060phospholipase/carboxylesterase family proteinO.I.H.G.S.X.
0.4658.40.97Zm.17628.1.S1_atCN845468--6e-17At2g34560katanin, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.995.7GSM202320B73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.494.9GSM202315B73 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.993.8GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.893.5GSM206330Lower pulvinus 2 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.793.2GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
2.692.9GSM202322B73x Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.692.9GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
2.692.9GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
2.692.9GSM202318B73xMo17 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
2.692.9GSM206326Upper pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage