Co-expression analysis

Gene ID Zm.4302.2.A1_a_at
Gene name protease inhibitor/seed storage/LTP family protein /// protease inhibitor/seed storage/LTP family protein /// PVR3-like protein
Homology with ArabidopsisSimilar to At1g79180: MYB63 (MYB DOMAIN PROTEIN 63) (HF=3e-1)
Module size 11 genes
NF 0.46
%ile 55.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.95Zm.4302.2.A1_a_atBM074215protease inhibitor/seed storage/LTP family protein /// protease inhibitor/seed storage/LTP family protein /// PVR3-like protein-3e-1At1g79180MYB63 (MYB DOMAIN PROTEIN 63)O.I.H.G.S.X.
0.6785.80.96Zm.15083.2.A1_atAY107613.1hypothetical protein LOC100276197-6e-4At3g56240CCH (COPPER CHAPERONE)O.I.H.G.S.X.
0.5976.10.96Zm.12539.1.A1_atAI600548--1e+0At5g64460-O.I.H.G.S.X.
0.5775.10.97Zm.12073.1.S1_atCF004248hypothetical protein LOC100276174-4e+0At5g57500transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.5469.80.96Zm.11178.1.A1_atAI745736--5e-1At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.5469.80.96Zm.5582.1.S1_atCD219417--6e-3At2g17980ATSLY1O.I.H.G.S.X.
0.5065.70.96Zm.2781.1.A1_atAY106687.1--5e+0At4g35480RHA3BO.I.H.G.S.X.
0.4455.70.96Zm.6175.1.A1_atAI714944hypothetical protein LOC100191780-2e+0At5g64620C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2)O.I.H.G.S.X.
0.3641.30.96Zm.1258.1.A1_atBG840128hypothetical protein LOC100193713-9e-1At1g62500protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3131.60.96Zm.3816.1.S1_atAY106865.1BURP domain containing protein-5e+0At2g11810MGDCO.I.H.G.S.X.
0.2216.90.96Zm.18383.1.A1_atAY110186.1delta(14)-sterol reductase-4e-18At3g52940FK (FACKEL)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.898.6GSM202320B73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
8.998.2GSM202315B73 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
7.597.8GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
7.497.8GSM202322B73x Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
6.397.4GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
6.297.4GSM202318B73xMo17 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
6.297.4GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
6.297.4GSM202324Mo17xB73 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
5.897.2GSM202306Mo17xB73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
5.296.9GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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