Co-expression analysis

Gene ID Zm.4288.1.A1_at
Gene name cyclin IaZm
Homology with ArabidopsisSimilar to At2g26760: CYCB1 (HF=4e-3)
Module size 9 genes
NF 0.30
%ile 27.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6481.70.96Zm.4288.1.A1_atAI622454cyclin IaZm-4e-3At2g26760CYCB1O.I.H.G.S.X.
0.4658.40.98Zm.7611.2.A1_atBM268818--2e-3At1g49400emb1129 (embryo defective 1129)O.I.H.G.S.X.
0.4251.30.97Zm.10827.1.S1_atBQ619419--8e-2At1g65730YSL7 (YELLOW STRIPE LIKE 7)O.I.H.G.S.X.
0.3538.90.97Zm.15852.2.A1_atAY108720.1--1e-41At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinO.I.H.G.S.X.
0.3233.40.97Zm.3999.1.S1_atCF024332hypothetical protein LOC100276811-3e+0At5g39860PRE1 (PACLOBUTRAZOL RESISTANCE1)O.I.H.G.S.X.
0.3131.60.98Zm.18485.1.S1_atAY104422.1DNA binding protein-4e-8At1g71260ATWHY2 (A. THALIANA WHIRLY 2)O.I.H.G.S.X.
0.2115.50.97Zm.6822.2.A1_atCO518852--3e-2At5g42560abscisic acid-responsive HVA22 family proteinO.I.H.G.S.X.
0.1710.60.96Zm.1980.1.A1_atCF630017hypothetical protein LOC100193990-2e+0At4g14410basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.1710.60.97Zm.1129.1.A1_atBE510577--1e+0At1g80730ZFP1 (ZINC-FINGER PROTEIN 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.999.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.299.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.998.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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