Co-expression analysis

Gene ID	Zm.4283.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g40290: eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative (HF=4e-26)
Module size	6 genes
NF	0.71
%ile	92.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.1	0.98	Zm.4283.2.S1_at	AY109824.1	-	-	4e-26	At2g40290	eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative	O.I.	H.G.	S.X.	Please select
0.91	99.0	0.98	Zm.3303.2.A1_at	CO527646	lipoxygenase	-	3e+0	At3g22400	LOX5	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.7598.1.A1_at	CF629653	-	-	3e-3	At2g40510	40S ribosomal protein S26 (RPS26A)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.98	Zm.155.2.S1_at	AY109498.1	-	-	4e-3	At4g32400	SHS1 (SODIUM HYPERSENSITIVE 1)	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.98	Zm.5305.1.A1_at	CK370425	ribonucleoprotein A	-	6e-4	At2g37220	29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.98	Zm.1011.1.S1_at	BM073180	hypothetical protein LOC100192700	-	3e+0	At1g35242	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.1	98.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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