Co-expression analysis

Gene ID	Zm.4271.5.A1_x_at
Gene name	hypothetical protein LOC100191665
Homology with Arabidopsis	Similar to At3g55470: C2 domain-containing protein (HF=2e+1)
Module size	9 genes
NF	0.41
%ile	47.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	81.1	0.97	Zm.4271.5.A1_x_at	AI881217	hypothetical protein LOC100191665	-	2e+1	At3g55470	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.98	Zm.10670.1.A1_at	CO529849	hypothetical protein LOC100280379	-	1e+0	At5g11410	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.97	Zm.5048.5.S1_a_at	CF634037	protein disulfide isomerase	-	7e-29	At2g47470	UNE5 (UNFERTILIZED EMBRYO SAC 5)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.1889.1.A1_at	CO520833	cytokinin-N-glucosyltransferase 1	-	1e-3	At3g55700	UDP-glucoronosyl/UDP-glucosyl transferase family protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.98	Zm.4860.2.S1_a_at	AI770577	mRNA decapping enzyme 2	-	3e+0	At2g34140	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.98	Zm.9880.1.A1_at	AY107767.1	-	-	1e-7	At2g22300	SR1 (SIGNAL RESPONSIVE 1)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.98	Zm.7166.1.A1_at	AF200532.1	cellulose synthase8	-	3e-36	At4g39350	CESA2 (CELLULOSE SYNTHASE A2)	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.98	Zm.4861.1.S1_at	AY109124.1	-	-	3e-1	At5g26070	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.98	Zm.4238.1.A1_at	BM073006	cleavage and polyadenylation specificity factor, 100 kDa subunit	-	8e-1	At2g14282	SCRL18 (SCR-Like 18)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
25.0	99.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.7	99.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.4	99.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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