Co-expression analysis

Gene ID Zm.4257.1.S1_at
Gene name respiratory burst oxidase protein A
Homology with ArabidopsisSimilar to At1g64060: ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F) (HF=5e-12)
Module size 12 genes
NF 0.58
%ile 77.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.98Zm.4257.1.S1_atAW076388respiratory burst oxidase protein A-5e-12At1g64060ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)O.I.H.G.S.X.
0.6785.80.98ZmAffx.936.1.S1_atAI677620--3e+0At3g10490anac052 (Arabidopsis NAC domain containing protein 52)O.I.H.G.S.X.
0.6785.80.98Zm.17521.1.S1_atCK370540complex 1 protein containing protein-2e+0At4g39340unknown proteinO.I.H.G.S.X.
0.6077.80.98Zm.6268.1.A1_atBM073308hypothetical protein LOC100192813-2e-3At2g16740UBC29 (ubiquitin-conjugating enzyme 29)O.I.H.G.S.X.
0.5674.40.98ZmAffx.996.1.A1_atAI857152--3e+0At5g02230haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.5674.40.98Zm.5313.2.A1_atCA39841860S ribosomal protein L12-9e-9At2g3719060S ribosomal protein L12 (RPL12A)O.I.H.G.S.X.
0.5674.40.98Zm.10112.1.A1_atBM268000--1e+0At5g23810AAP7O.I.H.G.S.X.
0.5267.30.98ZmAffx.398.1.A1_atAI676826--3e+0At4g15150glycine-rich proteinO.I.H.G.S.X.
0.5065.70.98Zm.13679.1.A1_atAW424469chemocyanin-9e-5At1g72230plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.4861.30.98Zm.14476.2.A1_atAY109949.1Protein disulfide isomerase-1e-5At3g54960ATPDIL1-3 (PDI-LIKE 1-3)O.I.H.G.S.X.
0.4861.30.98Zm.6532.4.S1_a_atBM380149dehydrin 13-9e-2At1g20440COR47 (COLD-REGULATED 47)O.I.H.G.S.X.
0.4455.70.98Zm.6973.1.A1_atAY109828.1Hypothetical protein LOC100216936-5e-1At4g28830methyltransferase/ nucleic acid bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.297.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
5.597.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
4.696.4GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
4.596.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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