Co-expression analysis

Gene ID Zm.4242.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g57240: BG3 (BETA-1,3-GLUCANASE 3) (HF=9e-2)
Module size 20 genes
NF 0.56
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.95Zm.4242.1.S1_atCD990106--9e-2At3g57240BG3 (BETA-1,3-GLUCANASE 3)O.I.H.G.S.X.
0.7892.50.96Zm.19201.2.A1_atCO526388Hypothetical protein LOC100216991-2e+0At5g39650unknown proteinO.I.H.G.S.X.
0.7389.90.96Zm.7765.1.A1_atBQ539662--3e-1At1g53170ERF8O.I.H.G.S.X.
0.7389.90.95Zm.12248.1.S1_atBM338038Hypothetical protein LOC100216999-4e+0At3g59870unknown proteinO.I.H.G.S.X.
0.7288.60.95Zm.8237.1.A1_a_atCB240143hypothetical protein LOC100276701-3e-1At1g16916unknown proteinO.I.H.G.S.X.
0.7087.00.96Zm.5860.4.A1_a_atAI759079mitochondrial-processing peptidase beta subunit-3e+0At4g19910Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.6886.10.95Zm.2300.1.A1_atAY108971.1--2e-1At2g04550IBR5 (INDOLE-3-BUTYRIC ACID RESPONSE 5)O.I.H.G.S.X.
0.6582.10.97Zm.6648.1.S1_atAY108962.1hypothetical protein LOC100272455-7e+0At5g64900PROPEP1O.I.H.G.S.X.
0.5875.10.93Zm.8946.1.A1_atBM339897Guanylyl cyclase-like protein-7e-4At5g05930guanylyl cyclase-related (GC1)O.I.H.G.S.X.
0.5775.10.97Zm.19204.1.S1_atCA404362protein phosphatase 2C-like-1e-3At1g09160protein phosphatase 2C-related / PP2C-relatedO.I.H.G.S.X.
0.5571.60.97Zm.19203.1.S1_atCO520849hypothetical protein LOC100193957-1e-5At3g07220transcriptional activator, putativeO.I.H.G.S.X.
0.5469.80.96Zm.6692.1.S1_atCA409229hypothetical protein LOC100193785-3e-24At3g24530AAA-type ATPase family protein / ankyrin repeat family proteinO.I.H.G.S.X.
0.5166.40.97Zm.19215.2.S1_atBG321066--2e-12At1g30480DRT111O.I.H.G.S.X.
0.4658.40.95Zm.2770.1.A1_atBM380104hypothetical protein LOC100192561-1e+0At2g17860pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.4556.40.96Zm.8732.1.A1_atBM347474esterase-3e+0At5g53030unknown proteinO.I.H.G.S.X.
0.4455.70.96Zm.3540.1.A1_atAW056006--1e+1At5g642502-nitropropane dioxygenase family / NPD familyO.I.H.G.S.X.
0.3742.30.98Zm.3450.1.A1_atAW066723hypothetical protein LOC100191605-4e+0At2g38695unknown proteinO.I.H.G.S.X.
0.3641.30.96Zm.5851.14.A1_atBE453943--9e-2At1g75270DHAR2 (DEHYDROASCORBATE REDUCTASE 2)O.I.H.G.S.X.
0.3437.20.97Zm.6731.1.A1_atAI395998hypothetical protein LOC100279494-1e-14At1g50670OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.2928.10.97Zm.10200.2.A1_atBM078569--1e+0At5g57990UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.697.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.090.2GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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