Co-expression analysis

Gene ID	Zm.4239.1.A1_at
Gene name	hypothetical protein LOC100193561
Homology with Arabidopsis	Similar to At5g04820: OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13) (HF=2e+0)
Module size	6 genes
NF	0.46
%ile	55.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.43	52.8	0.99	Zm.4239.1.A1_at	BM080569	hypothetical protein LOC100193561	-	2e+0	At5g04820	OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13)	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.99	Zm.3602.1.A1_at	BG873973	-	-	6e-1	At1g18490	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.99	Zm.2868.1.A1_at	CO521622	-	-	1e+0	At3g28560	-	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.99	Zm.4308.1.A1_at	AY112093.1	-	-	1e-1	At1g08390	nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.99	Zm.13635.1.A1_at	AY107316.1	growth regulator like protein	-	4e+0	At3g52070	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.99	Zm.1628.2.A1_at	AW787801	-	-	3e-1	At1g08465	YAB2 (YABBY2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.7	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.9	99.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.9	98.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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