Co-expression analysis

Gene ID Zm.42.1.S1_at
Gene name CDPK-related protein kinase
Homology with ArabidopsisSimilar to At2g46700: calcium-dependent protein kinase, putative / CDPK, putative (HF=9e-17)
Module size 10 genes
NF 0.20
%ile 14.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8294.60.86Zm.42.1.S1_atD84508.1CDPK-related protein kinase-9e-17At2g46700calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.3336.00.87Zm.5137.1.A1_a_atAI93203760S ribosomal protein L31-6e-6At2g1974060S ribosomal protein L31 (RPL31A)O.I.H.G.S.X.
0.3131.60.91Zm.9000.1.A1_atBM378319alpha-glucan phosphorylase, H isozyme-2e-22At3g46970PHS2 (ALPHA-GLUCAN PHOSPHORYLASE 2)O.I.H.G.S.X.
0.3131.60.95Zm.15394.1.S1_atBM268179hypothetical protein LOC100194032 /// adhesive/proline-rich protein /// adhesive/proline-rich protein-5e+0At4g08730unknown proteinO.I.H.G.S.X.
0.2928.10.92Zm.2189.1.A1_atBM074210hypothetical protein LOC100276717-3e-14At1g21065unknown proteinO.I.H.G.S.X.
0.2724.60.92Zm.35.1.S1_x_atAY434688.1--5e-1At4g33690unknown proteinO.I.H.G.S.X.
0.1710.60.85Zm.13810.1.S1_atAB042267.1hypothetical protein LOC100191253-6e-8At3g56380ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17)O.I.H.G.S.X.
0.158.60.90Zm.3722.1.A1_atBG874143PGR5-2e+1At5g24655LSU4 (RESPONSE TO LOW SULFUR 4)O.I.H.G.S.X.
0.115.30.90Zm.1639.3.S1_atBG842159--5e+0At4g22920NYE1 (NON-YELLOWING 1)O.I.H.G.S.X.
0.104.60.85Zm.3738.1.S1_atBM334767hypothetical protein LOC100191896-6e-1At2g13770unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.698.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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