Co-expression analysis

Gene ID	Zm.4194.1.A1_at
Gene name	hypothetical protein LOC100276018
Homology with Arabidopsis	Similar to At1g71180: 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein (HF=3e+0)
Module size	6 genes
NF	0.80
%ile	97.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	95.6	1.00	Zm.4194.1.A1_at	AI861230	hypothetical protein LOC100276018	-	3e+0	At1g71180	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.99	Zm.14617.1.A1_at	BM080453	Hypothetical protein LOC100191188	-	2e+0	At2g33130	RALFL18 (ralf-like 18)	O.I.	H.G.	S.X.	Please select
0.80	94.0	1.00	Zm.13975.1.A1_at	CK985455	carbonyl reductase 3	-	6e-1	At4g20880	ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)	O.I.	H.G.	S.X.	Please select
0.77	92.1	1.00	Zm.4853.1.S1_at	CD439703	-	-	2e-1	At2g45070	SEC61 BETA	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.99	ZmAffx.714.1.S1_at	AI739758	-	-	1e+1	At5g66930	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	1.00	Zm.12300.1.A1_at	CF626520	ruBisCO large subunit-binding protein subunit alpha	-	1e-37	At2g28000	CPN60A (CHAPERONIN-60ALPHA)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.5	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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