Co-expression analysis

Gene ID Zm.4168.1.A1_at
Gene name hypothetical protein LOC100274469
Homology with ArabidopsisSimilar to At4g38680: GRP2 (GLYCINE RICH PROTEIN 2) (HF=7e+0)
Module size 7 genes
NF 0.32
%ile 31.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.95Zm.4168.1.A1_atBM337240hypothetical protein LOC100274469-7e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.5775.10.96Zm.11773.2.A1_a_atCK347605hypothetical protein LOC100277518-1e+0At5g47610zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4455.70.97Zm.4986.2.S1_atAY103689.1UDP-glucose 6-dehydrogenase-9e-63At5g15490UDP-glucose 6-dehydrogenase, putativeO.I.H.G.S.X.
0.4455.70.97Zm.4361.1.A1_atCD436511hypothetical protein LOC100192530-2e+0At1g16320unknown proteinO.I.H.G.S.X.
0.2928.10.95Zm.14128.1.A1_atAI666223ZF-HD protein dimerisation region containing protein-3e-2At1g69600ZFHD1 (ZINC FINGER HOMEODOMAIN 1)O.I.H.G.S.X.
0.1811.60.94Zm.13499.1.S1_atAY108734.1oxidoreductase-1e-5At5g18900oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.1710.60.97Zm.19340.1.A1_atCO530664uracil phosphoribosyltransferase-1e+0At4g30180transcription factor/ transcription regulatorO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.699.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.989.6GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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