Co-expression analysis

Gene ID	Zm.4099.2.A1_s_at
Gene name	hypothetical protein LOC100191159
Homology with Arabidopsis	Similar to At2g38870: protease inhibitor, putative (HF=8e-1)
Module size	6 genes
NF	0.77
%ile	96.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.4099.2.A1_s_at	AI770849	hypothetical protein LOC100191159	-	8e-1	At2g38870	protease inhibitor, putative	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.98	Zm.18903.1.A1_at	CO530915	-	-	7e-2	At5g07400	forkhead-associated domain-containing protein / FHA domain-containing protein	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.98	Zm.12132.3.S1_a_at	AI461523	hypothetical protein LOC100192680	-	4e-50	At5g03240	UBQ3 (POLYUBIQUITIN 3)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.98	Zm.6418.1.S1_at	AY108322.1	hypothetical protein LOC100216693	-	2e-1	At3g44580	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.97	Zm.18590.1.A1_at	AW562614	exostosin-like	-	1e+0	At5g22930	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.98	ZmAffx.1097.1.S1_at	AW120085	-	-	1e+1	At5g25770	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.3	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320471	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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