| Gene ID | Zm.405.1.A1_at |
| Gene name | hypothetical LOC541674 |
| Homology with Arabidopsis | Similar to At5g05340: peroxidase, putative (HF=2e-1) |
| Module size | 6 genes |
| NF | 0.54 |
| %ile | 71.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.99 | Zm.405.1.A1_at | AF037034.2 | hypothetical LOC541674 | - | 2e-1 | At5g05340 | peroxidase, putative | O.I. | H.G. | S.X. | |
| 0.60 | 77.8 | 0.99 | Zm.13859.1.S1_at | AF439724.1 | methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cylcohydrolase isoform 1 | - | 1e-12 | At3g12290 | tetrahydrofolate dehydrogenase/cyclohydrolase, putative | O.I. | H.G. | S.X. | |
| 0.55 | 71.6 | 0.99 | Zm.7122.1.A1_at | AY111472.1 | - | - | 2e+0 | At1g35580 | CINV1 (cytosolic invertase 1) | O.I. | H.G. | S.X. | |
| 0.40 | 48.5 | 0.99 | Zm.17316.1.A1_at | CK369406 | - | - | 4e+0 | At5g38317 | LCR58 (Low-molecular-weight cysteine-rich 58) | O.I. | H.G. | S.X. | |
| 0.38 | 44.2 | 0.99 | Zm.2952.1.A1_a_at | CF629660 | hypothetical protein LOC100192920 | - | 2e-3 | At3g26680 | SNM1 (SENSITIVE TO NITROGEN MUSTARD 1) | O.I. | H.G. | S.X. | |
| 0.33 | 36.0 | 0.99 | Zm.6076.1.A1_a_at | AY111015.1 | COX VIIa-like protein | - | 3e-1 | At2g21195 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 17.5 | 99.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 16.4 | 99.0 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 14.8 | 98.9 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.3 | 98.8 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.7 | 98.7 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.5 | 98.7 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.0 | 98.6 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.0 | 98.6 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.1 | 98.5 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.5 | 95.1 | GSM385710 | Deep-sowing 10d treatment TIBA, biological rep2 | GSE15371 | Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.89 | 93.5 | GmaAffx.73853.1.S1_at | At5g05340 | - | - | 8e-3 | At5g06730 | peroxidase, putative | O.I. | H.G. | S.X. | |
| 0.20 | 25.1 | Gma.6617.1.S1_at | At5g05340 | - | - | 2e+0 | At5g06190 | unknown protein | O.I. | H.G. | S.X. | |
| 0.14 | 17.5 | GmaAffx.92608.1.S1_s_at | At5g05340 | - | - | 8e-6 | At2g37760 | aldo/keto reductase family protein | O.I. | H.G. | S.X. | |
| 0.11 | 14.2 | Gma.1546.1.S1_a_at | At5g05340 | - | - | 3e-6 | At1g62660 | beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar | O.I. | H.G. | S.X. | |
| 0.10 | 13.0 | GmaAffx.499.1.S1_at | At5g05340 | - | - | 2e-4 | At1g17950 | MYB52 (MYB DOMAIN PROTEIN 52) | O.I. | H.G. | S.X. | |
| 0.07 | 10.2 | Gma.15775.1.S1_at | At5g05340 | - | - | 2e-13 | At3g53880 | aldo/keto reductase family protein | O.I. | H.G. | S.X. | |
| 0.03 | 5.8 | GmaAffx.93522.1.S1_s_at | At5g05340 | - | - | 2e-11 | At1g15950 | CCR1 (CINNAMOYL COA REDUCTASE 1) | O.I. | H.G. | S.X. | |
| 0.03 | 5.8 | GmaAffx.21313.1.S1_s_at | At5g05340 | bZIP transcription factor bZIP62 | - | 2e-4 | At5g24800 | BZIP9 (BASIC LEUCINE ZIPPER 9) | O.I. | H.G. | S.X. | |
| 0.00 | 1.4 | Gma.12531.1.S1_at | At5g05340 | - | - | 4e-4 | At3g25420 | scpl21 (serine carboxypeptidase-like 21) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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