Co-expression analysis

Gene ID Zm.4037.1.A1_at
Gene name Zmhox1a homeobox protein
Homology with ArabidopsisSimilar to At3g19510: HAT3.1 (HF=3e-5)
Module size 15 genes
NF 0.45
%ile 54.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6279.80.94Zm.4037.1.A1_atX67561.1Zmhox1a homeobox protein-3e-5At3g19510HAT3.1O.I.H.G.S.X.
0.7087.00.96Zm.14054.1.S1_atAY104122.1hypothetical protein LOC100279504-8e-4At5g62290nucleotide-sensitive chloride conductance regulator (ICln) family proteinO.I.H.G.S.X.
0.5976.10.96Zm.13185.1.A1_atAY104045.1--1e-22At3g13060-O.I.H.G.S.X.
0.5875.10.96Zm.400.2.S1_atAI677573Pyruvate dehydrogenase (lipoamide) kinase1-3e-28At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)O.I.H.G.S.X.
0.5674.40.96Zm.3497.1.A1_atCF021745hypothetical protein LOC100272844-7e-31At4g31870ATGPX7 (glutathione peroxidase 7)O.I.H.G.S.X.
0.4961.90.96Zm.7671.1.A1_atBM073122hypothetical protein LOC100272470-8e-2At4g00232unknown proteinO.I.H.G.S.X.
0.4556.40.96Zm.5163.1.S1_atAY108468.1gda-1-7e-20At3g27090-O.I.H.G.S.X.
0.4556.40.96Zm.9311.1.A1_a_atBG842505hypothetical protein LOC100274965-5e+0At2g29180unknown proteinO.I.H.G.S.X.
0.4251.30.96Zm.7938.1.A1_atBM079591glycosyltransferase-7e+0At5g42567-O.I.H.G.S.X.
0.4149.70.97Zm.3084.1.A1_atCA404291hypothetical protein LOC100216830-9e-1At5g56600PRF3 (PROFILIN 3)O.I.H.G.S.X.
0.3641.30.96Zm.13853.1.S1_atAF272753.1kinesin heavy chain-1e-14At1g63640kinesin motor protein-relatedO.I.H.G.S.X.
0.3538.90.96Zm.13856.1.S1_atAF439727.1formate tetrahyrofolate ligase-9e-58At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)O.I.H.G.S.X.
0.3029.80.96Zm.18819.1.S1_atCO522421hypothetical protein LOC100193533-1e+0At5g65730xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.H.G.S.X.
0.2928.10.96Zm.13199.1.S1_atCA404238hypothetical protein LOC100191826-2e-7At3g17465RPL3P (RIBOSOMAL PROTEIN L3 PLASTID)O.I.H.G.S.X.
0.2724.60.96Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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