Co-expression analysis

Gene ID Zm.3982.1.A1_at
Gene name 50S ribosomal protein L21
Homology with ArabidopsisSimilar to At1g35680: 50S ribosomal protein L21, chloroplast / CL21 (RPL21) (HF=2e-3)
Module size 6 genes
NF 0.42
%ile 48.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.95Zm.3982.1.A1_atAW14668450S ribosomal protein L21-2e-3At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)O.I.H.G.S.X.
0.6179.50.96Zm.343.1.S1_atCB603836outer cell layer2-6e-3At4g00730ANL2 (ANTHOCYANINLESS 2)O.I.H.G.S.X.
0.5065.70.96Zm.9675.1.A1_atBM335265chitinase 2-5e+0At1g62250unknown proteinO.I.H.G.S.X.
0.3029.80.97Zm.19066.1.S1_atCD975063--1e-37At2g02000GAD3 (glutamate decarboxylase 3)O.I.H.G.S.X.
0.2928.10.97Zm.7976.1.S1_atBM080696hypothetical protein LOC100217261-2e-46At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)O.I.H.G.S.X.
0.2216.90.97Zm.15576.1.A1_a_atCK827910--3e-1At5g01860zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.098.7GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
12.598.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
10.698.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.296.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os02g0259600, orthologous to the query gene, Zm.3982.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8295.0Os02g0259600At1g35680-50S ribosomal protein L21, chloroplast precursor(CL21) (CS-L7)2e-3At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)O.I.H.G.S.X.
0.9299.1Os03g0452300At1g35680-30S ribosomal protein S52e-4At2g33800ribosomal protein S5 family proteinO.I.H.G.S.X.
0.9299.1Os03g0122200At1g35680-50S ribosomal protein L113e-2At1g32990PRPL11 (PLASTID RIBOSOMAL PROTEIN L11)O.I.H.G.S.X.
0.9299.1Os03g0704000At1g35680-30S ribosomal protein S13, chloroplast precursor(CS13)1e-1At5g1432030S ribosomal protein S13, chloroplast (CS13)O.I.H.G.S.X.
0.9097.1Os03g0828100At1g35680-50S ribosomal protein L181e-13At1g48350ribosomal protein L18 family proteinO.I.H.G.S.X.
0.9097.1Os03g0356300At1g35680-Ribosomal protein L6 family protein4e-17At1g05190emb2394 (embryo defective 2394)O.I.H.G.S.X.
0.9097.1Os03g0769100At1g35680-9S ribosomal protein5e-1At1g74970RPS9 (RIBOSOMAL PROTEIN S9)O.I.H.G.S.X.
0.9097.1Os03g0284400At1g35680-Ribosomal protein L10-like2e+0At5g43150unknown proteinO.I.H.G.S.X.
0.8996.9Os02g0137200At1g35680-50S ribosomal protein L3-1, chloroplast precursor2e-6At2g43030ribosomal protein L3 family proteinO.I.H.G.S.X.
0.8996.9Os02g0754300At1g35680--9e-1At4g10465metal ion bindingO.I.H.G.S.X.
0.8796.6Os03g0219900At1g35680-50S ribosomal protein L15, chloroplast precursor(CL15) (Fragment)5e-1At3g25920RPL15O.I.H.G.S.X.
0.8696.4Os01g0805000At1g35680-50S ribosomal protein L343e-1At3g42310unknown proteinO.I.H.G.S.X.
0.8395.8Os01g0662300At1g35680-Chloroplast 50S ribosomal protein L121e+0At5g65140trehalose-6-phosphate phosphatase, putativeO.I.H.G.S.X.
0.8395.8Os01g0749200At1g35680-50S ribosomal protein L131e-20At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.8194.8Os06g0332800At1g35680-Bundle sheath defective protein 21e-1At3g47650bundle-sheath defective protein 2 family / bsd2 familyO.I.H.G.S.X.
0.8094.6Os02g0822600At1g35680-50S ribosomal protein L9, chloroplast precursor(CL13)2e+0At3g44890RPL9 (RIBOSOMAL PROTEIN L9)O.I.H.G.S.X.
0.7793.1Os01g0678600At1g35680-Ribosomal protein S20 family protein1e-1At4g30460glycine-rich proteinO.I.H.G.S.X.
0.7591.9Os05g0186000At1g35680--1e+0At1g15220CCMHO.I.H.G.S.X.
0.7289.8Os01g0278900At1g35680-Hypothetical protein3e-7At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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