| Gene ID | Zm.3982.1.A1_at |
| Gene name | 50S ribosomal protein L21 |
| Homology with Arabidopsis | Similar to At1g35680: 50S ribosomal protein L21, chloroplast / CL21 (RPL21) (HF=2e-3) |
| Module size | 6 genes |
| NF | 0.42 |
| %ile | 48.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 85.8 | 0.95 | Zm.3982.1.A1_at | AW146684 | 50S ribosomal protein L21 | - | 2e-3 | At1g35680 | 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | O.I. | H.G. | S.X. | |
| 0.61 | 79.5 | 0.96 | Zm.343.1.S1_at | CB603836 | outer cell layer2 | - | 6e-3 | At4g00730 | ANL2 (ANTHOCYANINLESS 2) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.96 | Zm.9675.1.A1_at | BM335265 | chitinase 2 | - | 5e+0 | At1g62250 | unknown protein | O.I. | H.G. | S.X. | |
| 0.30 | 29.8 | 0.97 | Zm.19066.1.S1_at | CD975063 | - | - | 1e-37 | At2g02000 | GAD3 (glutamate decarboxylase 3) | O.I. | H.G. | S.X. | |
| 0.29 | 28.1 | 0.97 | Zm.7976.1.S1_at | BM080696 | hypothetical protein LOC100217261 | - | 2e-46 | At5g37680 | ATARLA1A (ADP-ribosylation factor-like A1A) | O.I. | H.G. | S.X. | |
| 0.22 | 16.9 | 0.97 | Zm.15576.1.A1_a_at | CK827910 | - | - | 3e-1 | At5g01860 | zinc finger (C2H2 type) family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 13.0 | 98.7 | GSM253281 | ZM_8d_SG200_3Alu_II | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 12.5 | 98.7 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.2 | 98.5 | GSM253280 | ZM_8d_SG200_3Alu_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 10.6 | 98.4 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.0 | 98.4 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.9 | 98.2 | GSM253282 | ZM_8d_SG200_3Alu_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 4.2 | 96.0 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.8 | 95.5 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.77 | 90.8 | Contig3960_at | At1g35680 | - | - | 2e-3 | At1g35680 | 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | O.I. | H.G. | S.X. | |
| 0.42 | 55.2 | Contig12507_at | At1g35680 | - | - | 2e-4 | At3g01930 | nodulin family protein | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | Contig3798_at | At1g35680 | - | - | 1e-30 | At2g40290 | eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative | O.I. | H.G. | S.X. | |
| 0.38 | 49.5 | Contig7314_at | At1g35680 | - | - | 5e-3 | At1g76970 | VHS domain-containing protein / GAT domain-containing protein | O.I. | H.G. | S.X. | |
| 0.23 | 26.1 | S0000800185F05F1_s_at | At1g35680 | - | - | 3e-7 | At1g78870 | UBC35 (UBIQUITIN-CONJUGATING ENZYME 35) | O.I. | H.G. | S.X. | |
| 0.17 | 16.9 | Contig7478_at | At1g35680 | - | - | 2e+0 | At1g36622 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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