Co-expression analysis

Gene ID Zm.3919.1.S1_at
Gene name hypothetical protein LOC100194180
Homology with ArabidopsisSimilar to At3g05280: integral membrane Yip1 family protein (HF=7e-16)
Module size 12 genes
NF 0.12
%ile 8.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.80.98Zm.3919.1.S1_atBG840867hypothetical protein LOC100194180-7e-16At3g05280integral membrane Yip1 family proteinO.I.H.G.S.X.
0.4048.50.98Zm.15854.1.S1_atCK370725--4e-39At4g38620MYB4O.I.H.G.S.X.
0.3233.40.98Zm.15352.3.S1_atCF919882hypothetical protein LOC100273764-5e-11At3g12170DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.3029.80.99Zm.2769.1.S1_atBM336917--5e-1At3g12030unknown proteinO.I.H.G.S.X.
0.2928.10.99ZmAffx.499.1.A1_atAI691724--1e+1At4g10910unknown proteinO.I.H.G.S.X.
0.2216.90.99ZmAffx.726.1.A1_atAI739956--3e+0At2g32360ubiquitin family proteinO.I.H.G.S.X.
0.2115.50.99Zm.2031.1.S1_atAY103664.1csu1120 protein-5e-4At3g50550unknown proteinO.I.H.G.S.X.
0.147.70.98Zm.4377.1.A1_atBM333786ubiquitin-conjugating enzyme E2 J2-7e-4At1g17280UBC34 (ubiquitin-conjugating enzyme 34)O.I.H.G.S.X.
0.104.60.99ZmAffx.772.1.A1_atAI746167--3e+0At1g30840ATPUP4O.I.H.G.S.X.
0.062.30.99Zm.6026.1.S1_atCA405322hypothetical protein LOC100194158-7e-21At3g07100protein transport protein Sec24, putativeO.I.H.G.S.X.
0.062.30.99Zm.1678.1.S1_atAW600497methylglutaconyl-CoA hydratase-2e+0At5g48690-O.I.H.G.S.X.
0.051.90.98Zm.1090.4.A1_atBQ547886--2e+0At4g17585unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.198.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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