| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 8.6 | 98.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes |  |
| 8.3 | 98.0 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.9 | 97.9 | GSM162267 | Mutant 1 with array type maize from Affymetrix | GSE7030 | Phenotypic and molecular characterisation of a novel Bt2 allele in maize | |
| 6.4 | 97.5 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.8 | 97.2 | GSM162265 | Wild type 1 with array type maize from Affymetrix | GSE7030 | Phenotypic and molecular characterisation of a novel Bt2 allele in maize | |
| 4.3 | 96.1 | GSM162264 | Mutant 2 with array type maize from Affymetrix | GSE7030 | Phenotypic and molecular characterisation of a novel Bt2 allele in maize | |
| 4.3 | 96.1 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM162266 | Wild type 2 with array type maize from Affymetrix | GSE7030 | Phenotypic and molecular characterisation of a novel Bt2 allele in maize | |
| 4.0 | 95.8 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.5 | 95.1 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|
| 0.98 | 100.0 | Os06g0110000 | At4g39260 | - | Ent-kaurenoic acid oxidase 2 (EC 1.14.13.79)(AtKAO2) (Cytochrome P450 88A4) | 2e-1 | At1g05160 | CYP88A3 (CYTOCHROME P450 88 A3) | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | Os09g0539200 | At4g39260 | - | Beta-galactosidase (EC 3.2.1.23) | 6e-3 | At5g63800 | MUM2 (MUCILAGE-MODIFIED 2) | O.I. | H.G. | S.X. | |
| 0.57 | 77.0 | Os01g0323100 | At4g39260 | - | Pto kinase interactor 1 | 1e-15 | At3g62220 | serine/threonine protein kinase, putative | O.I. | H.G. | S.X. | |
| 0.57 | 77.0 | Os09g0421300 | At4g39260 | - | Phospholipase D lambda | 2e-2 | At3g15730 | PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os08g0549200 | At4g39260 | - | Glycoside hydrolase, family 35 protein | 2e-5 | At4g26140 | BGAL12 (beta-galactosidase 12) | O.I. | H.G. | S.X. | |
| 0.53 | 71.3 | Os02g0593600 | At4g39260 | - | Leucine-rich repeat, typical subtype containingprotein | 4e-3 | At5g06990 | unknown protein | O.I. | H.G. | S.X. | |
| 0.52 | 69.6 | Os03g0115300 | At4g39260 | - | TPR-like domain containing protein | 5e+0 | At1g63960 | unknown protein | O.I. | H.G. | S.X. | |
| 0.52 | 69.6 | Os10g0466500 | At4g39260 | - | CONSTANS-like protein CO9 (Fragment) | 2e-13 | At1g04500 | zinc finger CONSTANS-related | O.I. | H.G. | S.X. | |
| 0.51 | 68.7 | Os05g0576800 | At4g39260 | - | MAP kinase homolog | 7e-39 | At3g18040 | MPK9 (MAP KINASE 9) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os02g0641000 | At4g39260 | - | Transcription factor L2 | 6e-15 | At3g61230 | LIM domain-containing protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os04g0638800 | At4g39260 | - | Plant-specific domain of unknown function 3588containing protein | 9e+0 | At5g23395 | - | O.I. | H.G. | S.X. | |
| 0.49 | 64.4 | Os02g0787200 | At4g39260 | - | Protein kinase domain containing protein | 2e-5 | At1g16760 | protein kinase family protein | O.I. | H.G. | S.X. | |
| 0.48 | 63.7 | Os07g0501700 | At4g39260 | - | C2 domain containing protein | 5e-4 | At2g42610 | LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10) | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | Os01g0914700 | At4g39260 | - | Peptidase A22B, minor histocompatibility antigenH13 family protein | 3e-4 | At1g05820 | aspartic-type endopeptidase/ peptidase | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | Os06g0472900 | At4g39260 | - | Haem peroxidase, plant/fungal/bacterial familyprotein | 1e-2 | At5g51890 | peroxidase | O.I. | H.G. | S.X. | |
| 0.45 | 58.8 | Os03g0172200 | At4g39260 | - | Mo25 family protein | 8e-1 | At1g72730 | eukaryotic translation initiation factor 4A, putative / eIF-4A, putative | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os01g0224700 | At4g39260 | - | Flavin monoxygenase-like protein floozy | 6e-2 | At4g28720 | flavin-containing monooxygenase family protein / FMO family protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os06g0206700 | At4g39260 | - | Kinesin, motor region domain containing protein | 2e-27 | At3g12020 | kinesin motor protein-related | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | Os09g0297900 | At4g39260 | - | Conserved hypothetical protein | 2e+0 | At3g42310 | unknown protein | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | Os05g0559000 | At4g39260 | - | Glyoxal oxidase, N-terminal domain containingprotein | 7e-2 | At1g14430 | glyoxal oxidase-related | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | Os05g0595200 | At4g39260 | - | Allergen V5/Tpx-1 related family protein | 3e-6 | At1g64440 | RHD1 (ROOT HAIR DEFECTIVE 1) | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | Os02g0588300 | At4g39260 | - | Fimbrin-like protein (Actin binding motif) | 6e-18 | At4g26700 | ATFIM1 | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os03g0139500 | At4g39260 | - | CONSTANS-like protein CO9 (Fragment) | 3e-3 | At2g33350 | - | O.I. | H.G. | S.X. | |
| 0.37 | 45.0 | Os04g0604000 | At4g39260 | - | Actin filament bundling protein P-115-ABP | 8e-15 | At4g30160 | VLN4 (ARABIDOPSIS THALIANA VILLIN 4) | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os01g0706900 | At4g39260 | - | Auxin conjugate hydrolase (ILL5) | 2e-1 | At1g51760 | IAR3 (IAA-ALANINE RESISTANT 3) | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os02g0559300 | At4g39260 | - | Protein kinase domain containing protein | 1e-4 | At1g71530 | protein kinase family protein | O.I. | H.G. | S.X. | |
| 0.35 | 41.7 | Os05g0252000 | At4g39260 | - | Oligopeptide transporter OPT superfamily protein | 1e-3 | At1g48370 | YSL8 (YELLOW STRIPE LIKE 8) | O.I. | H.G. | S.X. | |
| 0.35 | 41.7 | Os11g0689300 | At4g39260 | - | Calmodulin-binding protein MPCBP | 2e-2 | At2g43040 | NPG1 (no pollen germination 1) | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | Os02g0659100 | At4g39260 | - | Zn-finger, C2H2 type domain containing protein | 8e-2 | At5g41440 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | Os02g0272300 | At4g39260 | - | - | 2e-5 | At1g79860 | ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12) | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os04g0644000 | At4g39260 | - | Conserved hypothetical protein | 6e-2 | At2g25270 | unknown protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os12g0633400 | At4g39260 | - | Pathogenesis-related protein PR-1 precursor | 8e-1 | At2g36030 | unknown protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os05g0149100 | At4g39260 | - | C2 domain containing protein | 9e-1 | At4g09680 | unknown protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os07g0108400 | At4g39260 | - | GTPase activating protein-like | 2e-1 | At1g23140 | C2 domain-containing protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os08g0447900 | At4g39260 | - | Adenylyl cyclase associated protein | 2e-10 | At4g34490 | ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os03g0838500 | At4g39260 | - | Proteinase inhibitor I9, subtilisin propeptidedomain containing protein | 1e+0 | At5g09540 | DNAJ heat shock N-terminal domain-containing protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os04g0447400 | At4g39260 | - | Glutamate decarboxylase isozyme 2 | 6e-36 | At2g02010 | GAD4 (glutamate decarboxylase 4) | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os11g0191800 | At4g39260 | - | Hypothetical protein | 6e-1 | At3g47350 | short-chain dehydrogenase/reductase (SDR) family protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os04g0555700 | At4g39260 | - | Actin-depolymerizing factor (ADF) | 2e-18 | At4g25590 | ADF7 (actin depolymerizing factor 7) | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | Os11g0153200 | At4g39260 | - | Carbonic anhydrase, eukaryotic family protein | 1e+0 | At2g32300 | UCC1 (UCLACYANIN 1) | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | Os07g0108500 | At4g39260 | - | C2 domain containing protein | 4e-1 | At4g21160 | ZAC | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | Os08g0521200 | At4g39260 | - | Receptor-like protein kinase 1 | 3e-1 | At5g25220 | KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3) | O.I. | H.G. | S.X. | |
