Co-expression analysis

Gene ID	Zm.3876.1.S1_at
Gene name	hypothetical protein LOC100278092
Homology with Arabidopsis	Similar to At4g17030: ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1) (HF=5e+0)
Module size	6 genes
NF	0.61
%ile	81.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.95	Zm.3876.1.S1_at	AY111960.1	hypothetical protein LOC100278092	-	5e+0	At4g17030	ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.94	Zm.13055.2.S1_at	CA403909	nuclear transcription factor Y subunit B-3	-	6e-19	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.92	Zm.13136.1.A1_at	CA404810	hypothetical protein LOC100191921	-	4e+0	At4g32900	aminoacyl-tRNA hydrolase	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.95	Zm.4733.1.A1_at	CD441088	hypothetical protein LOC100193930	-	2e-14	At1g76900	AtTLP1 (TUBBY LIKE PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.95	ZmAffx.818.1.S1_at	AI770442	plant-specific domain TIGR01568 family protein	-	3e+0	At5g05380	PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.95	Zm.17833.1.S1_at	CK394754	hypothetical protein LOC100277612	-	2e+0	At3g13740	URF 4-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.2	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.8	97.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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