Co-expression analysis

Gene ID Zm.384.1.A1_at
Gene name physical impedance induced protein2
Homology with ArabidopsisSimilar to At5g03100: F-box family protein (HF=6e+0)
Module size 6 genes
NF 0.70
%ile 92.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.98Zm.384.1.A1_atAF001635.1physical impedance induced protein2-6e+0At5g03100F-box family proteinO.I.H.G.S.X.
0.9199.00.98ZmAffx.1020.1.A1_atAI881536--3e-7At1g75640leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.8094.00.98Zm.16532.2.A1_atAW33155460S ribosomal protein L18a-4e-69At3g1460060S ribosomal protein L18A (RPL18aC)O.I.H.G.S.X.
0.7792.10.98Zm.2806.1.A1_a_atAW067337--6e-1At2g41660MIZ1 (mizu-kussei 1)O.I.H.G.S.X.
0.5065.70.98Zm.9791.1.S1_atAY110405.1hypothetical protein LOC100216896-1e-78At3g5258040S ribosomal protein S14 (RPS14C)O.I.H.G.S.X.
0.5065.70.98Zm.5194.1.A1_atBM269267--1e-3At2g46070MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.398.4GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
7.497.8GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
7.397.8GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
6.897.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM162265Wild type 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
5.196.8GSM206297Lower pulvinus 30 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
4.596.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig9737_s_at, orthologous to the query gene, Zm.384.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.2Contig9737_s_atAt5g03100--8e-9At3g51250senescence/dehydration-associated protein-relatedO.I.H.G.S.X.
0.4762.2Contig11248_atAt5g03100--2e+0At1g75550glycine-rich proteinO.I.H.G.S.X.
0.4356.4Contig7588_atAt5g03100--5e-1At4g2623060S ribosomal protein L31 (RPL31B)O.I.H.G.S.X.
0.3747.9Contig10300_atAt5g03100--4e-2At4g21740unknown proteinO.I.H.G.S.X.
0.3747.9Contig24322_atAt5g03100--5e+0At2g04425LCR82 (Low-molecular-weight cysteine-rich 82)O.I.H.G.S.X.
0.3747.9Contig15509_atAt5g03100--2e-3At1g10522unknown proteinO.I.H.G.S.X.
0.3342.6Contig11383_atAt5g03100--2e+0At4g36560unknown proteinO.I.H.G.S.X.
0.3138.6HM11D03r_s_atAt5g03100--8e-4At2g24300calmodulin-binding proteinO.I.H.G.S.X.
0.3037.0Contig11789_atAt5g03100--2e+0At3g04620nucleic acid bindingO.I.H.G.S.X.
0.3037.0Contig9797_atAt5g03100--1e-2At1g23010LPR1 (Low Phosphate Root1)O.I.H.G.S.X.
0.2935.5Contig6491_atAt5g03100--6e-1At5g02230haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.2935.5Contig4158_atAt5g03100--8e-63At1g60780HAP13 (HAPLESS 13)O.I.H.G.S.X.
0.2732.1Contig15654_atAt5g03100--8e+0At5g16160unknown proteinO.I.H.G.S.X.
0.2630.4Contig9995_atAt5g03100--7e-4At2g22300SR1 (SIGNAL RESPONSIVE 1)O.I.H.G.S.X.
0.2528.9Contig9507_atAt5g03100--6e-1At2g43950OEP37O.I.H.G.S.X.
0.2528.9Contig18587_atAt5g03100--3e-2At5g10320unknown proteinO.I.H.G.S.X.
0.2326.1Contig12484_atAt5g03100--8e-5At5g02580unknown proteinO.I.H.G.S.X.
0.2326.1Contig20549_atAt5g03100--2e-27At2g39480PGP6 (P-GLYCOPROTEIN 6)O.I.H.G.S.X.
0.1716.9Contig13468_atAt5g03100--2e+0At2g33850unknown proteinO.I.H.G.S.X.
0.1615.3Contig25651_atAt5g03100--5e-1At2g41225unknown proteinO.I.H.G.S.X.
0.1311.6Contig5487_s_atAt5g03100--3e-1At5g65207unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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