Co-expression analysis

Gene ID	Zm.3832.1.S1_at
Gene name	actin-depolymerizing factor
Homology with Arabidopsis	Similar to At4g25590: ADF7 (actin depolymerizing factor 7) (HF=1e-13)
Module size	8 genes
NF	0.66
%ile	88.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.88	96.7	0.96	Zm.3832.1.S1_at	AY112267.1	actin-depolymerizing factor	-	1e-13	At4g25590	ADF7 (actin depolymerizing factor 7)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.96	Zm.10122.1.S1_at	BM380628	transmembrane emp24 domain-containing protein 10	-	2e-3	At1g57620	emp24/gp25L/p24 family protein	O.I.	H.G.	S.X.	Please select
0.64	81.7	0.96	Zm.9017.1.A1_at	BM338660	Hypothetical protein LOC100193460	-	2e+0	At1g64290	F-box protein-related	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.97	Zm.6743.3.S1_at	AY104585.1	hypothetical protein LOC100216801	-	2e-10	At3g02420	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.97	Zm.5542.1.S1_at	CO518213	Hypothetical protein LOC100193112	-	7e-4	At3g15140	exonuclease family protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.97	Zm.18462.1.S1_at	CO517427	-	-	1e+0	At4g09550	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.96	Zm.3058.1.A1_at	BM338821	glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform	-	6e-36	At3g27300	G6PD5 (glucose-6-phosphate dehydrogenase 5)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.4613.1.A1_at	CK826972	-	-	5e-1	At1g73770	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.6	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.4	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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