Co-expression analysis

Gene ID Zm.383.1.S1_s_at
Gene name leucine-rich repeat transmembrane protein kinase 2
Homology with ArabidopsisSimilar to At3g14350: SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) (HF=1e-22)
Module size 13 genes
NF 0.57
%ile 76.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.00.98Zm.383.1.S1_s_atAF023165.1leucine-rich repeat transmembrane protein kinase 2-1e-22At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)O.I.H.G.S.X.
0.7490.30.98Zm.496.1.S1_atAF236370.1prohibitin3-7e-7At5g40770ATPHB3 (PROHIBITIN 3)O.I.H.G.S.X.
0.5976.10.98Zm.17636.1.A1_atCK368463--1e+0At5g34882-O.I.H.G.S.X.
0.5976.10.98Zm.7152.1.A1_atAY110483.1hypothetical protein LOC100216962-7e-5At5g47500pectinesterase family proteinO.I.H.G.S.X.
0.5875.10.98Zm.16536.1.A1_atAY103592.1spermidine synthase 1-1e-17At1g23820SPDS1 (spermidine synthase 1)O.I.H.G.S.X.
0.5775.10.98Zm.3086.2.A1_a_atCF633704alpha-1,4-glucan-protein synthase-5e+0At4g11350transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.5674.40.97Zm.16547.1.A1_atCO520746aldehyde dehydrogenase, dimeric NADP-preferring-6e+0At3g10020unknown proteinO.I.H.G.S.X.
0.5571.60.97Zm.16536.1.A1_a_atAY103592.1hypothetical protein LOC100272866 /// spermidine synthase 1-1e-17At1g23820SPDS1 (spermidine synthase 1)O.I.H.G.S.X.
0.5369.10.98Zm.17902.1.A1_atCK786798--3e+0At5g65350histone H3O.I.H.G.S.X.
0.5267.30.98Zm.6207.2.A1_x_atBM07865160S ribosomal protein L15-2e-31At4g1739060S ribosomal protein L15 (RPL15B)O.I.H.G.S.X.
0.4759.90.98Zm.5018.3.A1_atAI668145--9e-1At5g48920TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)O.I.H.G.S.X.
0.4455.70.98Zm.4024.1.A1_atAY105692.1--1e-3At2g35170MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedO.I.H.G.S.X.
0.3945.60.98Zm.13423.1.A1_atAI738122--1e+0At3g59350serine/threonine protein kinase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.898.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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