Co-expression analysis

Gene ID Zm.382.1.S1_at
Gene name leucine-rich transmembrane protein kinase1
Homology with ArabidopsisSimilar to At3g14350: SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) (HF=4e-16)
Module size 10 genes
NF 0.31
%ile 29.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.96Zm.382.1.S1_atCF020226leucine-rich transmembrane protein kinase1-4e-16At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)O.I.H.G.S.X.
0.4658.40.97Zm.4204.1.S1_a_atAY103547.1--2e-26At2g24200cytosol aminopeptidaseO.I.H.G.S.X.
0.4658.40.98ZmAffx.758.1.A1_atAI746000hypothetical protein LOC100273671-3e-3At4g22260IM (IMMUTANS)O.I.H.G.S.X.
0.4251.30.96Zm.2888.1.A1_atAY108014.1hypothetical protein LOC100191922-1e-3At2g17370HMG2 (3-HYDROXY-3-METHYLGLUTARYL-COA REDUCTASE 2)O.I.H.G.S.X.
0.3945.60.97Zm.7069.1.S1_atAF036891.2plastid starch synthase I precursor-3e-4At5g24300SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1)O.I.H.G.S.X.
0.3538.90.97Zm.3623.1.S1_atBG873827hypothetical protein LOC100216808-7e+0At5g52440HCF106O.I.H.G.S.X.
0.2419.80.96Zm.2758.1.A1_atAW067110--2e-6At2g25730unknown proteinO.I.H.G.S.X.
0.2318.60.97Zm.16988.1.A1_atL10634.1beta-7 tubulin-4e-117At5g23860TUB8O.I.H.G.S.X.
0.2115.50.97Zm.18259.1.A1_x_atCN844705B12D protein-2e+1At5g4577560S ribosomal protein L11 (RPL11D)O.I.H.G.S.X.
0.1811.60.97Zm.4755.1.A1_atAW091219--8e-9At5g14040mitochondrial phosphate transporterO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.198.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM253277ZM_8d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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