Co-expression analysis

Gene ID Zm.3724.3.A1_a_at
Gene name hypothetical protein LOC100192116
Homology with ArabidopsisSimilar to At2g34540: unknown protein (HF=1e+0)
Module size 17 genes
NF 0.60
%ile 80.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.97Zm.3724.3.A1_a_atCF624766hypothetical protein LOC100192116-1e+0At2g34540unknown proteinO.I.H.G.S.X.
0.8896.70.98Zm.6259.1.A1_atAI691171transferase, transferring glycosyl groups-2e+0At4g23490fringe-related proteinO.I.H.G.S.X.
0.7288.60.99Zm.16537.1.S1_atAY103617.140S ribosomal protein SA-4e-70At1g72370P40O.I.H.G.S.X.
0.7188.20.98Zm.6984.8.A1_a_atAI770763Hypothetical protein LOC100193571-4e+0At5g28615-O.I.H.G.S.X.
0.6785.80.98Zm.3200.1.A1_atBM080499--1e+0At4g38220aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeO.I.H.G.S.X.
0.6582.10.98Zm.8581.1.A1_atBM267381hypothetical protein LOC100216584-4e-2At3g46030HTB11O.I.H.G.S.X.
0.5775.10.97Zm.3672.1.S1_atAW453362vacuolar ATP synthase 21 kDa proteolipid subunit-8e-34At2g25610H+-transporting two-sector ATPase, C subunit family proteinO.I.H.G.S.X.
0.5775.10.98Zm.12837.1.A1_atAY106006.1--2e+0At1g72170unknown proteinO.I.H.G.S.X.
0.5775.10.98Zm.16845.1.A1_atBM079430--2e-2At2g42910ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4)O.I.H.G.S.X.
0.5775.10.98Zm.16846.1.A1_atAY103657.1seed specific protein Bn15D1B-3e+1At5g07110PRA1.B6 (PRENYLATED RAB ACCEPTOR 1.B6)O.I.H.G.S.X.
0.5674.40.98Zm.6849.1.A1_atAI065467hypothetical protein LOC100275227-4e+0At5g01380transcription factorO.I.H.G.S.X.
0.5571.60.99Zm.3673.1.A1_atAW037200--6e-21At1g14000VIK (VH1-INTERACTING KINASE)O.I.H.G.S.X.
0.5571.60.98Zm.16848.2.A1_atCD437503hypothetical protein LOC100193258-1e-7At3g2223060S ribosomal protein L27 (RPL27B)O.I.H.G.S.X.
0.5166.40.98Zm.11150.1.A1_atCO518263hypothetical protein LOC100279642-2e+0At5g61110protein binding / zinc ion bindingO.I.H.G.S.X.
0.4658.40.98Zm.14501.3.A1_atAY107741.1NAC domain-containing protein 68-2e-15At3g44110ATJ3O.I.H.G.S.X.
0.4352.80.98Zm.15845.1.S1_atCF244242hypothetical protein LOC100216966-5e+0At3g10850GLY2O.I.H.G.S.X.
0.4251.30.98Zm.6905.1.A1_a_atAF461814.1histone1a-6e-1At4g04620ATG8B (autophagy 8b)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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