| Gene ID | Zm.3701.1.S1_at |
| Gene name | cysteine protease 1 |
| Homology with Arabidopsis | Similar to At5g43060: cysteine proteinase, putative / thiol protease, putative (HF=1e-2) |
| Module size | 6 genes |
| NF | 0.75 |
| %ile | 95.4 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.94 | Zm.3701.1.S1_at | CF636730 | cysteine protease 1 | - | 1e-2 | At5g43060 | cysteine proteinase, putative / thiol protease, putative | O.I. | H.G. | S.X. | |
| 0.91 | 99.0 | 0.95 | Zm.370.1.S1_at | AF023159.1 | starch synthase DULL1 | - | 1e-21 | At1g11720 | ATSS3 (starch synthase 3) | O.I. | H.G. | S.X. | |
| 0.73 | 89.9 | 0.94 | Zm.3410.1.A1_at | AB035645.1 | ferredoxin | - | 1e-42 | At5g66190 | FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1) | O.I. | H.G. | S.X. | |
| 0.61 | 79.5 | 0.93 | Zm.3284.1.A1_at | BM952816 | - | - | 7e-1 | At3g01850 | ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | O.I. | H.G. | S.X. | |
| 0.55 | 71.6 | 0.95 | Zm.4005.1.A1_at | BE345363 | - | - | 4e+0 | At1g68140 | - | O.I. | H.G. | S.X. | |
| 0.46 | 58.4 | 0.93 | Zm.10467.1.S1_at | CA826991 | hypothetical protein LOC100274742 | - | 1e+0 | At2g27580 | zinc finger (AN1-like) family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 15.7 | 99.0 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.6 | 98.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.8 | 98.7 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.4 | 98.7 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.4 | 98.5 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.8 | 98.5 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.9 | 98.3 | GSM205369 | Mo17 13 DAP endosperm tissue biological replicate 2 | GSE8275 | Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP | |
| 9.9 | 98.3 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.3 | 98.0 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.5 | 97.8 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 68.0 | Os04g0670200 | At5g43060 | - | Cysteine protease component of protease-inhibitorcomplex | 2e-5 | At1g47128 | RD21 (responsive to dehydration 21) | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os02g0717500 | At5g43060 | - | - | 2e-10 | At5g48020 | unknown protein | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os06g0660800 | At5g43060 | - | Protein kinase domain containing protein | 5e-6 | At1g53730 | SRF6 (STRUBBELIG-RECEPTOR FAMILY 6) | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os07g0507000 | At5g43060 | - | Protein phosphatase 2C | 1e-5 | At4g28400 | protein phosphatase 2C, putative / PP2C, putative | O.I. | H.G. | S.X. | |
| 0.13 | 8.2 | Os05g0339200 | At5g43060 | - | Conserved hypothetical protein | 2e+0 | At1g57565 | - | O.I. | H.G. | S.X. | |
| 0.06 | 3.0 | Os04g0674400 | At5g43060 | - | Protein of unknown function DUF689 family protein | 2e-1 | At3g57670 | NTT (NO TRANSMITTING TRACT) | O.I. | H.G. | S.X. | |
| 0.04 | 2.0 | Os07g0584000 | At5g43060 | - | Yippee-like protein CG15309 | 4e+0 | At3g22510 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
Back to the CoP portal site
Back to the KAGIANA project homepage