Co-expression analysis

Gene ID Zm.3693.1.A1_at
Gene name 16.9 kDa class I heat shock protein 1
Homology with ArabidopsisSimilar to At1g53540: 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) (HF=3e-8)
Module size 12 genes
NF 0.41
%ile 46.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.99Zm.3693.1.A1_atAI06590916.9 kDa class I heat shock protein 1-3e-8At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)O.I.H.G.S.X.
0.5369.10.99Zm.4814.3.A1_atCD440511elongation factor 1-beta-2e-10At1g30230elongation factor 1-beta / EF-1-betaO.I.H.G.S.X.
0.4861.30.99Zm.15546.1.A1_atCD219276hypothetical protein LOC100276392-1e+0At5g01734unknown proteinO.I.H.G.S.X.
0.4455.71.00Zm.10487.1.S1_atCF009695desiccation-associated protein-1e-1At1g12665-O.I.H.G.S.X.
0.4251.31.00ZmAffx.190.1.A1_atAI881316--5e-2At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)O.I.H.G.S.X.
0.3945.60.99Zm.3859.1.A1_atBM335999ubiquitin-conjugating enzyme E2-17 kDa-4e-57At2g02760ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2)O.I.H.G.S.X.
0.3844.20.99Zm.19.1.S1_atM57249.1phospholipid transfer protein homolog1-5e+0At4g32105galactosyltransferaseO.I.H.G.S.X.
0.3641.30.99Zm.11475.1.A1_a_atBQ539206hypothetical protein LOC100273223-1e-3At2g45330emb1067 (embryo defective 1067)O.I.H.G.S.X.
0.3336.00.99Zm.16779.1.A1_a_atCF626512hypothetical protein LOC100216924 /// hypothetical protein LOC100273958-2e-3At5g48810CB5-D (CYTOCHROME B5 ISOFORM D)O.I.H.G.S.X.
0.3233.40.99ZmAffx.543.1.S1_atAI712085--3e+0At4g03510RMA1O.I.H.G.S.X.
0.3029.80.99Zm.16189.3.S1_atCD484948--4e-1At2g40290eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putativeO.I.H.G.S.X.
0.2419.80.99Zm.5087.1.A1_atAI600775--3e-1At5g37478-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.098.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage