Co-expression analysis

Gene ID	Zm.368.1.A1_at
Gene name	glucose-6-phosphate/phosphate-translocator precursor
Homology with Arabidopsis	Similar to At1g61800: GPT2 (HF=4e-37)
Module size	7 genes
NF	0.58
%ile	76.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.98	Zm.368.1.A1_at	AF020813.1	glucose-6-phosphate/phosphate-translocator precursor	-	4e-37	At1g61800	GPT2	O.I.	H.G.	S.X.	Please select
0.86	96.3	0.98	Zm.3679.1.A1_at	CF036994	hypothetical protein LOC100279871	-	1e-36	At2g47510	FUM1 (FUMARASE 1)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.98	Zm.10262.1.S1_s_at	AF351191.1	-	-	8e-1	At5g55750	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.4076.1.S1_at	BM266703	esterase	-	5e-2	At1g09390	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.3672.1.S1_at	AW453362	vacuolar ATP synthase 21 kDa proteolipid subunit	-	8e-34	At2g25610	H+-transporting two-sector ATPase, C subunit family protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.98	Zm.3674.1.S1_at	AW037202	-	-	3e+0	At2g29880	unknown protein	O.I.	H.G.	S.X.	Please select
0.37	42.3	0.98	Zm.8581.1.A1_at	BM267381	hypothetical protein LOC100216584	-	4e-2	At3g46030	HTB11	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.3	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
5.7	97.2	GSM162265	Wild type 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
5.2	96.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Back to the CoP portal site

Back to the KAGIANA project homepage