Co-expression analysis

Gene ID Zm.3670.2.A1_a_at
Gene name glycine-rich protein A3
Homology with ArabidopsisSimilar to At2g38120: AUX1 (AUXIN RESISTANT 1) (HF=5e-19)
Module size 38 genes
NF 0.37
%ile 40.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.00.96Zm.3670.2.A1_a_atAY109327.1glycine-rich protein A3-5e-19At2g38120AUX1 (AUXIN RESISTANT 1)O.I.H.G.S.X.
0.6279.80.98Zm.6154.2.S1_atCK347109hypothetical protein LOC100274324-7e+0At4g23880unknown proteinO.I.H.G.S.X.
0.6179.50.98Zm.14138.2.A1_a_atCD219182hypothetical protein LOC100275347-3e-9At1g56423unknown proteinO.I.H.G.S.X.
0.5875.10.98Zm.6393.3.A1_atAI739811H1 histone-6e+0At4g33710pathogenesis-related protein, putativeO.I.H.G.S.X.
0.5775.10.97Zm.6694.1.A1_atBM382291bifunctional nuclease-like-2e-1At5g28610-O.I.H.G.S.X.
0.5469.80.97Zm.4828.1.A1_atCA402577--1e-3At1g55475unknown proteinO.I.H.G.S.X.
0.5267.30.97Zm.6666.2.S1_atBI47886426S proteasome non-ATPase regulatory subunit 8-8e-22At1g64520RPN12a (Regulatory Particle non-ATPase 12a)O.I.H.G.S.X.
0.5166.40.98Zm.3095.1.S1_atCO524214hypothetical protein LOC100192080-4e-2At5g17820peroxidase 57 (PER57) (P57) (PRXR10)O.I.H.G.S.X.
0.5065.70.97Zm.7131.1.A1_atAY108795.1hypothetical protein LOC100191916-1e-9At3g06170TMS membrane family protein / tumour differentially expressed (TDE) family proteinO.I.H.G.S.X.
0.5065.70.98Zm.10299.1.S1_atAW172106--7e-1At4g15910ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)O.I.H.G.S.X.
0.4961.90.96Zm.5781.1.A1_atCK369535hypothetical protein LOC100278740-3e-14At4g3386540S ribosomal protein S29 (RPS29C)O.I.H.G.S.X.
0.4961.90.96Zm.7117.1.A1_a_atAY104703.1hypothetical protein LOC100273279 /// remorin-5e+0At5g28630glycine-rich proteinO.I.H.G.S.X.
0.4961.90.97Zm.4824.5.A1_x_atAI621837hypothetical protein LOC100273118-1e-8At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.4861.30.97Zm.1599.1.S1_a_atAW562477hypothetical protein LOC100280212-6e-5At4g19410pectinacetylesterase, putativeO.I.H.G.S.X.
0.4861.30.98Zm.615.1.S1_atAF057183.1porin2-2e-12At3g16240DELTA-TIPO.I.H.G.S.X.
0.4759.90.96Zm.9589.1.A1_atBM333304--3e-1At2g22320unknown proteinO.I.H.G.S.X.
0.4658.40.98Zm.5910.1.S1_atAB018590.1GR2b protein-2e+0At4g31660transcriptional factor B3 family proteinO.I.H.G.S.X.
0.4556.40.97Zm.14501.1.A1_atCA404906hypothetical protein LOC100191411-4e-50At5g22060ATJ2O.I.H.G.S.X.
0.4556.40.98Zm.6784.1.A1_atAI396307erwinia induced protein 2-8e-6At3g03160unknown proteinO.I.H.G.S.X.
0.4455.70.98Zm.12750.1.S1_a_atCA402457--9e-16At4g39080VHA-A3 (VACUOLAR PROTON ATPASE A3)O.I.H.G.S.X.
0.4455.70.98Zm.11253.1.A1_atAY107823.1Hypothetical protein LOC100193102-1e+0At5g17390universal stress protein (USP) family proteinO.I.H.G.S.X.
0.4352.80.97Zm.1599.2.A1_atAY106613.1--2e+0At1g52240ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11)O.I.H.G.S.X.
0.4149.70.98Zm.9958.1.A1_atBM333322--6e-2At3g01320SNL1 (SIN3-LIKE 1)O.I.H.G.S.X.
0.3945.60.97Zm.14501.4.A1_atCK849957Hypothetical protein LOC100191411-3e-46At5g22060ATJ2O.I.H.G.S.X.
0.3844.20.97RPTR-Zm-M10961-4_atRPTR-Zm-M10961-4---O.I.H.G.S.X.
0.3742.30.98Zm.5912.2.S1_a_atAI665330IDP277 protein-4e+0At1g08165unknown proteinO.I.H.G.S.X.
0.3641.30.97Zm.11823.1.A1_atBM381036Hypothetical protein LOC100191819-2e+1At5g41060zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.3437.20.97Zm.14501.3.A1_atAY107741.1NAC domain-containing protein 68-2e-15At3g44110ATJ3O.I.H.G.S.X.
0.3233.40.98Zm.19007.1.A1_atCO528314MADS-box protein AGL66-1e-2At1g77980AGL66 (AGAMOUS-LIKE 66)O.I.H.G.S.X.
0.3029.80.98Zm.3934.1.S1_atAI947382hypothetical protein LOC100277172-8e+0At4g28460unknown proteinO.I.H.G.S.X.
0.2928.10.98Zm.14344.1.A1_atCO529314subtilisin-like protease-2e-7At3g14067subtilase family proteinO.I.H.G.S.X.
0.2419.80.97Zm.7012.12.S1_a_atAI691869Ribosomal protein S8-4e+0At5g13220JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)O.I.H.G.S.X.
0.2318.60.97Zm.16527.1.A1_s_atCF637778hypothetical protein LOC100277800-5e-13At1g03260-O.I.H.G.S.X.
0.2318.60.97Zm.16590.2.A1_x_atBQ703359--7e-5At1g14170KH domain-containing proteinO.I.H.G.S.X.
0.2216.90.96Zm.6074.1.A1_atCF033495SINA4-1e-8At4g27880seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.2115.50.97Zm.12801.1.A1_atCO524502MON1-2e+0At4g15053unknown proteinO.I.H.G.S.X.
0.2115.50.98Zm.17931.1.A1_atCK827676hydrogen-transporting ATP synthase, rotational mechanism-5e+0At4g34265unknown proteinO.I.H.G.S.X.
0.2014.20.97Zm.16590.3.A1_atAY104237.1DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide-2e-34At5g51940NRPB6AO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.998.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
5.296.9GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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