Co-expression analysis

Gene ID	Zm.3633.3.S1_a_at
Gene name	APx1 - Cytosolic Ascorbate Peroxidase /// ascorbate peroxidase
Homology with Arabidopsis	Similar to At1g07890: APX1 (ascorbate peroxidase 1) (HF=6e-12)
Module size	7 genes
NF	0.50
%ile	64.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.96	Zm.3633.3.S1_a_at	AW067076	APx1 - Cytosolic Ascorbate Peroxidase /// ascorbate peroxidase	-	6e-12	At1g07890	APX1 (ascorbate peroxidase 1)	O.I.	H.G.	S.X.	Please select
0.63	81.1	0.97	Zm.5024.1.A1_at	AI600448	isoamyl acetate-hydrolyzing esterase	-	4e+0	At3g27210	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.97	Zm.2384.1.S1_at	AY104473.1	hypothetical protein LOC100273133	-	3e-2	At3g18380	sequence-specific DNA binding / transcription factor	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.3845.1.A1_at	AI711969	hypothetical protein LOC100274222	-	2e-7	At5g38470	DNA repair protein RAD23, putative	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.12940.2.S1_at	AI770813	-	-	8e-1	At4g15050	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.98	Zm.5435.1.A1_at	CO519825	mTERF-like protein	-	1e+0	At3g60870	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.98	Zm.5237.1.A1_at	AY107290.1	hypothetical protein LOC100273890	-	2e-19	At1g47260	GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	94.9	GSM290555	CCR mutant M1 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.1	94.3	GSM290553	WS1 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
2.4	92.2	GSM290556	CCR mutant M2 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
2.3	91.7	GSM290554	WS2 with array type maize from Affymetrix	GSE11531	Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
2.3	91.7	GSM206300	Upper pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.2	91.3	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.2	91.3	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
2.1	90.8	GSM206294	Lower pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.1	90.8	GSM206288	Upper pulvinus 2 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
1.9	89.6	GSM206306	Lower pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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