Co-expression analysis

Gene ID Zm.3633.3.S1_a_at
Gene name APx1 - Cytosolic Ascorbate Peroxidase /// ascorbate peroxidase
Homology with ArabidopsisSimilar to At1g07890: APX1 (ascorbate peroxidase 1) (HF=6e-12)
Module size 7 genes
NF 0.50
%ile 64.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.96Zm.3633.3.S1_a_atAW067076APx1 - Cytosolic Ascorbate Peroxidase /// ascorbate peroxidase-6e-12At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.6381.10.97Zm.5024.1.A1_atAI600448isoamyl acetate-hydrolyzing esterase-4e+0At3g27210unknown proteinO.I.H.G.S.X.
0.5571.60.97Zm.2384.1.S1_atAY104473.1hypothetical protein LOC100273133-3e-2At3g18380sequence-specific DNA binding / transcription factorO.I.H.G.S.X.
0.5065.70.97Zm.3845.1.A1_atAI711969hypothetical protein LOC100274222-2e-7At5g38470DNA repair protein RAD23, putativeO.I.H.G.S.X.
0.3844.20.97Zm.12940.2.S1_atAI770813--8e-1At4g15050unknown proteinO.I.H.G.S.X.
0.3336.00.98Zm.5435.1.A1_atCO519825mTERF-like protein-1e+0At3g60870DNA-binding protein-relatedO.I.H.G.S.X.
0.2622.70.98Zm.5237.1.A1_atAY107290.1hypothetical protein LOC100273890-2e-19At1g47260GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.494.9GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
3.194.3GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
2.492.2GSM290556CCR mutant M2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
2.391.7GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
2.391.7GSM206300Upper pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM206303Upper pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM253277ZM_8d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
2.190.8GSM206294Lower pulvinus 2 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.190.8GSM206288Upper pulvinus 2 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
1.989.6GSM206306Lower pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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