Co-expression analysis

Gene ID	Zm.3632.1.S1_at
Gene name	KED-like protein /// cylicin-1
Homology with Arabidopsis	Similar to At3g05060: SAR DNA-binding protein, putative (HF=2e-1)
Module size	10 genes
NF	0.33
%ile	32.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.62	79.8	0.96	Zm.3632.1.S1_at	CF627896	KED-like protein /// cylicin-1	-	2e-1	At3g05060	SAR DNA-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.9708.1.A1_at	BQ538651	DNA binding protein	-	4e-1	At4g16160	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.879.1.A1_at	BM379556	hypothetical protein LOC100276616	-	7e+0	At5g35300	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.12345.1.A1_at	BM416967	mediator complex subunit 10 CG5057-PA	-	2e-3	At1g26665	-	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.98	Zm.2583.1.S1_at	CN845475	ATP/GTP binding protein	-	8e+0	At3g23240	ERF1 (ETHYLENE RESPONSE FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.97	Zm.9568.1.A1_x_at	CD435747	hypothetical protein LOC100191846	-	6e-58	At3g03250	UGP (UDP-glucose pyrophosphorylase)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.98	Zm.7779.1.A1_at	CF630385	3-hydroxybutyryl-CoA dehydratase	-	4e-8	At4g16210	ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.97	Zm.2548.1.A1_at	AY106256.1	-	-	2e-26	At4g02570	ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.98	Zm.8818.1.A1_at	BM268303	-	-	9e-2	At2g01500	PFS2 (PRETTY FEW SEEDS 2)	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.98	Zm.16958.3.A1_x_at	CF049902	-	-	1e+0	At5g16130	40S ribosomal protein S7 (RPS7C)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.6	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.8	99.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.3	99.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.7	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.4	99.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.0	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.3	98.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.0	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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