Co-expression analysis

Gene ID Zm.3608.1.A1_at
Gene name protein lap1
Homology with ArabidopsisSimilar to At3g11330: leucine-rich repeat family protein (HF=6e-4)
Module size 8 genes
NF 0.55
%ile 72.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5571.60.99Zm.3608.1.A1_atBG842128protein lap1-6e-4At3g11330leucine-rich repeat family proteinO.I.H.G.S.X.
0.6785.81.00Zm.361.1.A1_atAB060130.1response regulator 8-5e-3At3g16857ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1)O.I.H.G.S.X.
0.6481.71.00Zm.3610.1.A1_atAW065778hypothetical protein LOC100276901-2e+0At4g04360unknown proteinO.I.H.G.S.X.
0.5571.61.00ZmAffx.982.4.S1_atAW787457--3e+0At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)O.I.H.G.S.X.
0.4861.30.99Zm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.4861.31.00Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinO.I.H.G.S.X.
0.4455.71.00Zm.13228.1.S1_atCA452580LHT1-5e+0At4g17585unknown proteinO.I.H.G.S.X.
0.4455.71.00Zm.14302.1.A1_atBG841920proteasome subunit alpha type 3-9e-28At2g27020PAG1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.898.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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