Co-expression analysis

Gene ID	Zm.359.1.S1_at
Gene name	kinase interacting kinase1
Homology with Arabidopsis	Similar to At3g16030: CES101 (CALLUS EXPRESSION OF RBCS 101) (HF=2e-6)
Module size	13 genes
NF	0.37
%ile	40.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	75.1	0.93	Zm.359.1.S1_at	U82481.1	kinase interacting kinase1	-	2e-6	At3g16030	CES101 (CALLUS EXPRESSION OF RBCS 101)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.95	Zm.10224.2.S1_a_at	CF243959	hypothetical protein LOC100192800	-	1e-5	At3g11397	PRA1.A3 (PRENYLATED RAB ACCEPTOR 1.A3)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.96	Zm.8552.1.A1_at	BM347529	hypothetical protein LOC100275365	-	1e+0	At1g35340	ATP-dependent protease La (LON) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.96	Zm.14438.1.A1_at	CO520860	VAMP-like protein YKT62	-	4e-12	At5g58180	ATYKT62	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.96	Zm.16759.1.A1_at	BM338376	lactoylglutathione lyase	-	1e-11	At1g08110	lactoylglutathione lyase, putative / glyoxalase I, putative	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.96	Zm.13343.1.S1_at	CA832209	Hypothetical protein LOC100192517	-	4e+1	At5g45880	pollen Ole e 1 allergen and extensin family protein	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.96	Zm.6273.1.A1_at	AY108611.1	patellin-5	-	2e-5	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.95	Zm.13562.1.S1_at	AY108090.1	PCO099415 protein	-	6e-3	At5g18840	sugar transporter, putative	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.95	Zm.10085.1.A1_at	BM382598	-	-	6e+0	At4g02270	pollen Ole e 1 allergen and extensin family protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.95	Zm.18296.1.S1_at	CO534082	hypothetical protein LOC100216667	-	3e-6	At1g63780	IMP4	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.95	Zm.2047.1.S1_at	AJ006541	-	-	6e-1	At5g65890	ACR1 (ACT Domain Repeat 1)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.96	Zm.13808.1.S1_at	AY104740.1	hypothetical protein LOC100279847	-	6e-4	At4g03240	FH (FRATAXIN HOMOLOG)	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.94	Zm.485.1.A1_at	AF236080.1	hemoglobin	-	1e-1	At5g42860	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.0	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM253272	ZM_4.5d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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