| Gene ID | Zm.3573.1.A1_at |
| Gene name | peroxidase 54 |
| Homology with Arabidopsis | Similar to At5g06720: peroxidase, putative (HF=3e-3) |
| Module size | 6 genes |
| NF | 0.54 |
| %ile | 71.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.99 | Zm.3573.1.A1_at | CF629925 | peroxidase 54 | - | 3e-3 | At5g06720 | peroxidase, putative | O.I. | H.G. | S.X. | |
| 0.60 | 77.8 | 0.98 | Zm.3376.1.A1_at | AY104431.1 | hypothetical protein LOC100273263 | - | 5e-2 | At2g21730 | CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.98 | Zm.6905.1.A1_a_at | AF461814.1 | histone1a | - | 6e-1 | At4g04620 | ATG8B (autophagy 8b) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.98 | Zm.5819.1.S1_at | AI649779 | - | - | 6e-4 | At1g29900 | CARB (CARBAMOYL PHOSPHATE SYNTHETASE B) | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.99 | Zm.6116.1.A1_at | CK347339 | - | - | 9e-16 | At3g02320 | RNA binding / tRNA (guanine-N2-)-methyltransferase | O.I. | H.G. | S.X. | |
| 0.26 | 22.7 | 0.99 | RPTR-Zm-M57289-1_s_at | RPTR-Zm-M57289-1 | - | - | - | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 15.1 | 98.9 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.4 | 98.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.2 | 98.5 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.0 | 98.5 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.8 | 98.3 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.5 | 98.3 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.3 | 98.0 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.0 | 97.7 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.5 | 97.1 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.0 | 94.0 | GSM320457 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 68.0 | Os10g0109300 | At5g06720 | - | Peroxidase (EC 1.11.1.7) | 5e-5 | At1g14540 | anionic peroxidase, putative | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os08g0137400 | At5g06720 | - | Plastocyanin-like domain containing protein | 1e-1 | At2g20760 | protein binding / structural molecule | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os01g0850700 | At5g06720 | - | Multicopper oxidase, type 1 domain containingprotein | 3e-13 | At3g09220 | LAC7 (laccase 7) | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os05g0163300 | At5g06720 | - | Beta-Ig-H3/fasciclin domain containing protein | 6e-1 | At1g29420 | - | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os06g0179000 | At5g06720 | - | Glycoside hydrolase, family 79, N-terminal domaincontaining protein | 3e-1 | At5g34940 | AtGUS3 (Arabidopsis thaliana glucuronidase 3) | O.I. | H.G. | S.X. | |
| 0.05 | 2.5 | Os08g0114300 | At5g06720 | - | Plant-specific FAD-dependent oxidoreductase familyprotein | 7e-2 | At2g46750 | FAD-binding domain-containing protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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